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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003354000
- symbol?: —
- synonym:
- description?: DNA-binding protein
- DNA-binding protein
- DUF177 domain-containing protein
- nucleic acid-binding protein
- protein in cluster with ribosomal protein L32p
- YlbN-like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3720059..3720616
- synteny block?: BlockID0024380
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1083 (ylbN)
08BA02176:
C248_1153
11819-97:
MS7_1083
6850:
RSAU_001011
71193:
ST398NM01_1123
ECT-R 2:
ECTR2_981
ED133:
SAOV_1068
ED98:
SAAV_1093
HO 5096 0412:
SAEMRSA15_09560
JH1:
SaurJH1_1208
JH9:
SaurJH9_1186
JKD6008:
SAA6008_01081
JKD6159:
SAA6159_00981
LGA251:
SARLGA251_10390
M013:
M013TW_1058
MRSA252:
SAR1100
MSHR1132:
SAMSHR1132_09730
MSSA476:
SAS1061
Mu3:
SAHV_1118
Mu50:
SAV1127
MW2:
MW1009
RF122:
SAB0991
ST398:
SAPIG1123
T0131:
SAT0131_01165
TCH60:
HMPREF0772_12106
TW20:
SATW20_11210
USA300_TCH1516:
—
VC40:
SAVC_04795
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKWSITQLRKYQGKPFEFDQTVSFDNLKESLDLIDLSPITIQGQLTIKSTEVVADIHITG
N315 MKWSITQLRKYQGKPFEFDQTVSFDNLKESLDLIDLSPITIQGQLTIKSTEVVADIHITG
NCTC8325 MKWSITQLRKYQGKPFEFDQTVSFDNLKESLDLIDLSPITIQGQLTIKSTEVVADIHITG
Newman MKWSITQLRKYQGKPFEFDQTVSFDNLKESLDLIDLSPITIQGQLTIKSTEVVADIHITG
USA300_FPR3757 MKWSITQLRKYQGKPFEFDQTVSFDNLKESLDLIDLSPITIQGQLTIKSTEVVADIHITG
************************************************************
COL TYTMPCARTLVPVKVPLDVTTTEVFDLEGYNQYNDDQDDVDEHYHIIKDGMVNLQDIVED
N315 TYTMPCARTLVPVKVPLDVTTTEVFDLEGYNQYNDDQDDVDEHYHIIKDGMVNLQDIVED
NCTC8325 TYTMPCARTLVPVKVPLDVTTTEVFDLEGYNQYNDDQDDVDEHYHIIKDGMVNLQDIVED
Newman TYTMPCARTLVPVKVPLDVTTTEVFDLEGYNQYNDDQDDVDEHYHIIKDGMVNLQDIVED
USA300_FPR3757 TYTMPCARTLVPVKVPLDVTTTEVFDLEGYNQYNDDQDDVDEHYHIIKDGMVNLQDIVED
************************************************************
COL IVIIEKPMRAYSEQSDQMLTVGNGWEVIDEDQLDELAKQQEQDDSESRQVDPRLQKLQQL
N315 IVIIEKPMRAYSEQSDQMLTVGNGWEVIDEDQLDELAKQQEQDDSESRQVDPRLQKLQQL
NCTC8325 IVIIEKPMRAYSEQSDQMLTVGNGWEVIDEDQLDELAKQQEQDDSESRQVDPRLQKLQQL
Newman IVIIEKPMRAYSEQSDQMLTVGNGWEVIDEDQLDELAKQQEQDDSESRQVDPRLQKLQQL
USA300_FPR3757 IVIIEKPMRAYSEQSDQMLTVGNGWEVIDEDQLDELAKQQEQDDSESRQVDPRLQKLQQL
************************************************************
COL YDKEQ
N315 YDKEQ
NCTC8325 YDKEQ
Newman YDKEQ
USA300_FPR3757 YDKEQ
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