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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003481000
- symbol?: pyrC
- synonym:
- description?: dihydroorotase
- dihydroorotase
- dihydroorotase PyrC
- dihydroorotase (DHOase)
- putative dihydroorotase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3820479..3821756
- synteny block?: BlockID0025600
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1159 (pyrC)
08BA02176:
C248_1230 (pyrC)
11819-97:
MS7_1158 (pyrC)
6850:
RSAU_001084 (pyrC)
71193:
ST398NM01_1198
ECT-R 2:
ECTR2_1056 (pyrC)
ED133:
SAOV_1204
ED98:
SAAV_1172 (pyrC)
HO 5096 0412:
SAEMRSA15_10340 (pyrC)
JH1:
SaurJH1_1285 (pyrC)
JH9:
SaurJH9_1260 (pyrC)
JKD6008:
SAA6008_01155 (pyrC)
JKD6159:
SAA6159_01054 (pyrC)
LGA251:
SARLGA251_11120 (pyrC)
M013:
M013TW_1136
MRSA252:
SAR1177 (pyrC)
MSHR1132:
SAMSHR1132_10420
MSSA476:
SAS1135 (pyrC)
Mu3:
SAHV_1191 (pyrC)
Mu50:
SAV1201 (pyrC)
MW2:
MW1084 (pyrC)
RF122:
SAB1065 (pyrC)
ST398:
SAPIG1198
T0131:
SAT0131_01249
TCH60:
HMPREF0772_12031 (pyrC)
TW20:
SATW20_11950 (pyrC)
USA300_TCH1516:
USA300HOU_1139 (pyrC)
VC40:
SAVC_05170 (pyrC)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVH
N315 MKLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVH
NCTC8325 MKLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVH
Newman MKLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVH
USA300_FPR3757 MKLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVH
************************************************************
COL LREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLP
N315 LREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLP
NCTC8325 LREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLP
Newman LREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLP
USA300_FPR3757 LREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLP
************************************************************
COL YASITTRQLGKELVDFPALVKEGAFAFTDDGVGVQTASMMYEGMIEAAKVNKAIVAHCED
N315 YASITTRQLGKELVDFPALVKEGAFAFTDDGVGVQTASMMYEGMIEAAKVNKAIVAHCED
NCTC8325 YASITTRQLGKELVDFPALVKEGAFAFTDDGVGVQTASMMYEGMIEAAKVNKAIVAHCED
Newman YASITTRQLGKELVDFPALVKEGAFAFTDDGVGVQTASMMYEGMIEAAKVNKAIVAHCED
USA300_FPR3757 YASITTRQLGKELVDFPALVKEGAFAFTDDGVGVQTASMMYEGMIEAAKVNKAIVAHCED
************************************************************
COL NSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKESVRVI
N315 NSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKESVRVI
NCTC8325 NSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKESVRVI
Newman NSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKESVRVI
USA300_FPR3757 NSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKESVRVI
************************************************************
COL RDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTIDCI
N315 RDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTIDCI
NCTC8325 RDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTIDCI
Newman RDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTIDCI
USA300_FPR3757 RDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTIDCI
************************************************************
COL ATDHAPHARDEKAQPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETF
N315 ATDHAPHARDEKAQPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETF
NCTC8325 ATDHAPHARDEKAQPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETF
Newman ATDHAPHARDEKAQPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETF
USA300_FPR3757 ATDHAPHARDEKAQPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETF
************************************************************
COL NLEYGTLKENGYADLTIIDLDSEQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKF
N315 NLEYGTLKENGYADLTIIDLDSEQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKF
NCTC8325 NLEYGTLKENGYADLTIIDLDSEQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKF
Newman NLEYGTLKENGYADLTIIDLDSEQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKF
USA300_FPR3757 NLEYGTLKENGYADLTIIDLDSEQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKF
************************************************************
COL EGDK
N315 EGDK
NCTC8325 EGDK
Newman EGDK
USA300_FPR3757 EGDK
****