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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003496000
- symbol?: —
- synonym:
- description?: lipoprotein, putative
- lipoprotein, putative
- putative lipoprotein
- lipoprotein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3836413..3837405
- synteny block?: BlockID0025750
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1171
08BA02176:
C248_1243
11819-97:
MS7_1171
6850:
RSAU_001095
71193:
ST398NM01_1212
ECT-R 2:
ECTR2_1069
ED133:
SAOV_1216
ED98:
SAAV_1185
HO 5096 0412:
SAEMRSA15_10460
JH1:
SaurJH1_1297
JH9:
SaurJH9_1272
JKD6008:
SAA6008_01168
JKD6159:
SAA6159_01066
JSNZ:
JSNZ_001182
LGA251:
SARLGA251_11240
M013:
M013TW_1151
MRSA252:
SAR1189
MSHR1132:
SAMSHR1132_10540
MSSA476:
SAS1147
Mu3:
SAHV_1203
Mu50:
SAV1213
MW2:
MW1096
RF122:
SAB1077
ST398:
SAPIG1212
T0131:
SAT0131_01262 (moaB)
TCH60:
HMPREF0772_12019
TW20:
SATW20_12070
USA300_TCH1516:
USA300HOU_1151
VC40:
SAVC_05230
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKTLGCLLLIMLLVVAGCSFGGNHKLSSKKSEESKQETVKKESEEEKDPDLEKYEEIEK
N315 MKKTLGCLLLIMLLVVAGCSFGGNHKLSSKKSEESKQETVKKESEEEKDPDLEKYEEIEK
NCTC8325 MKKTLGCLLLIMLLVVAGCSFGGNHKLSSKKSEESKQETVKKESEEEKDPDLEKYEEIEK
Newman MKKTLGCLLLIMLLVVAGCSFGGNHKLSSKKSEESKQETVKKESEEEKDPDLEKYEEIEK
USA300_FPR3757 MKKTLGCLLLIMLLVVAGCSFGGNHKLSSKKSEESKQETVKKESEEEKDPDLEKYEEIEK
************************************************************
COL KMKGIKDAPSLDKLDPLMTEKSFTNSKGIQGWKDYKELMGKVELADYRFTKDSKGSSIKD
N315 KMKGIKDAPSLDKLDPLMTEKSFTNSKGIQGWKDYKELMGKVELADYRFTKDSKGSSIKD
NCTC8325 KMKGIKDAPSLDKLDPLMTEKSFTNSKGIQGWKDYKELMGKVELADYRFTKDSKGSSIKD
Newman KMKGIKDAPSLDKLDPLMTEKSFTNSKGIQGWKDYKELMGKVELADYRFTKDSKGSSIKD
USA300_FPR3757 KMKGIKDAPSLDKLDPLMTEKSFTNSKGIQGWKDYKELMGKVELADYRFTKDSKGSSIKD
************************************************************
COL VDAFFKGKKGIKRKVIETHDDVKQVDYWYVDPDGKKIGNSNTPVFYAEIMTKYKDGKLVY
N315 VDAFFKGKKGIKRKVIETHDDVKQVDYWYVDPDGKKIGNSNTPVFYAEIMTKYKDGKLVY
NCTC8325 VDAFFKGKKGIKRKVIETHDDVKQVDYWYVDPDGKKIGNSNTPVFYAEIMTKYKDGKLVY
Newman VDAFFKGKKGIKRKVIETHDDVKQVDYWYVDPDGKKIGNSNTPVFYAEIMTKYKDGKLVY
USA300_FPR3757 VDAFFKGKKGIKRKVIETHDDVKQVDYWYVDPDGKKIGNSNTPVFYAEIMTKYKDGKLVY
************************************************************
COL ASVEPGSYVIHKDDAIKYDDYSKLKKLSQLTKLDHPKPVPYSVAQIKSFGVPLTSVSFMT
N315 ASVEPGSYVIHKDDAIKYDDYSKLKKLSQLTKLDHPKPVPYSVAQIKSFGVPLTSVSFMT
NCTC8325 ASVEPGSYVIHKDDAIKYDDYSKLKKLSQLTKLDHPKPVPYSVAQIKSFGVPLTSVSFMT
Newman ASVEPGSYVIHKDDAIKYDDYSKLKKLSQLTKLDHPKPVPYSVAQIKSFGVPLTSVSFMT
USA300_FPR3757 ASVEPGSYVIHKDDAIKYDDYSKLKKLSQLTKLDHPKPVPYSVAQIKSFGVPLTSVSFMT
************************************************************
COL HGSKDTKDEVLPALAYFTFSPKNYEDKSNPDPKVLNLVHMDFLNASSDFGNAHFVVLSKY
N315 HGSKDTKDEVLPALAYFTFSPKNYEDKSNPDPKVLNLVHMDFLNASSDFGNAHFVVLSKY
NCTC8325 HGSKDTKDEVLPALAYFTFSPKNYEDKSNPDPKVLNLVHMDFLNASSDFGNAHFVVLSKY
Newman HGSKDTKDEVLPALAYFTFSPKNYEDKSNPDPKVLNLVHMDFLNASSDFGNAHFVVLSKY
USA300_FPR3757 HGSKDTKDEVLPALAYFTFSPKNYEDKSNPDPKVLNLVHMDFLNASSDFGNAHFVVLSKY
************************************************************
COL IKEYESNYETASDDSLK
N315 IKEYESNYETASDDSLK
NCTC8325 IKEYESNYETASDDSLK
Newman IKEYESNYETASDDSLK
USA300_FPR3757 IKEYESNYETASDDSLK
*****************