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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003561000
- symbol?: uppS
- synonym:
- description?: isoprenyl transferase
- isoprenyl transferase
- undecaprenyl pyrophosphate synthase
- UDP pyrophosphate synthase
- undecaprenyl pyrophosphate synthetase
- di-trans,poly-cis-decaprenylcistransferase
- UDP diphosphate synthase
- undecaprenyl diphosphate synthase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3894635..3895405
- synteny block?: BlockID0026380
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1218 (uppS)
08BA02176:
C248_1293 (uppS)
11819-97:
MS7_1218 (uppS)
6850:
RSAU_001142 (uppS)
71193:
ST398NM01_1262
ECT-R 2:
ECTR2_1116 (uppS)
ED133:
SAOV_1262
ED98:
SAAV_1235 (uppS)
HO 5096 0412:
SAEMRSA15_10930 (uppS)
JH1:
SaurJH1_1346
JH9:
SaurJH9_1320
JKD6008:
SAA6008_01215 (uppS)
JKD6159:
SAA6159_01115 (uppS)
LGA251:
SARLGA251_11710 (uppS)
M013:
M013TW_1200
MRSA252:
SAR1236 (uppS)
MSHR1132:
SAMSHR1132_11030
MSSA476:
SAS1194
Mu3:
SAHV_1250 (uppS)
Mu50:
SAV1260 (uppS)
MW2:
MW1143 (uppS)
RF122:
SAB1122 (uppS)
ST398:
SAPIG1262 (uppS)
T0131:
SAT0131_01313
TCH60:
HMPREF0772_11969 (uppS)
TW20:
SATW20_12540 (uppS)
USA300_TCH1516:
USA300HOU_1192 (uppS)
VC40:
SAVC_05465
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKI
N315 MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKI
NCTC8325 MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKI
Newman MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKI
USA300_FPR3757 MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKI
************************************************************
COL TRVASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFT
N315 TRIASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFT
NCTC8325 TRVASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFT
Newman TRVASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFT
USA300_FPR3757 TRVASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFT
**:*********************************************************
COL DKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIID
N315 DKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIID
NCTC8325 DKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIID
Newman DKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIID
USA300_FPR3757 DKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIID
************************************************************
COL ETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCI
N315 ETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCI
NCTC8325 ETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCI
Newman ETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCI
USA300_FPR3757 ETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCI
************************************************************
COL KIYQSRQRRFGGLSEE
N315 KIYQSRQRRFGGLSEE
NCTC8325 KIYQSRQRRFGGLSEE
Newman KIYQSRQRRFGGLSEE
USA300_FPR3757 KIYQSRQRRFGGLSEE
****************