⊟Summary[edit | edit source]

pan ID^?: SAUPAN003744000
symbol^?: alsT
synonym:
description^?: alanine:cation symporter family protein
- alanine:cation symporter family protein
- sodium:alanine symporter family protein
- amino acid carrier protein
- sodium:alanine symporter family protein, putative
- amino-acid carrier protein alsT
- AGCS family alanine/glycine:sodium (Na+) symporter
- AGCS family alanine or glycine:sodium (Na+) or proton (H+) symporter
- amino acid carrier family protein
- amino acid carrier protein (sodium/alanine symporter)
- Na(+)-linked D-alanine glycine permease
strand^?: +
coordinates^?: 4042442..4043938
synteny block^?: BlockID0028070
occurrence^?: in 100% of 33 strains

⊟Orthologs[edit | edit source]

COL:

SACOL1392

N315:

SA1190 (alsT)

NCTC8325:

SAOUHSC_01354

Newman:

NWMN_1269

USA300_FPR3757:

SAUSA300_1252

04-02981:

SA2981_1310 (alsT)

08BA02176:

C248_1393

11819-97:

MS7_1314

6850:

RSAU_001238 (alsT)

71193:

ST398NM01_1358

ECT-R 2:

ECTR2_1214 (agcS)

ED133:

SAOV_1368

ED98:

SAAV_1337

HO 5096 0412:

SAEMRSA15_12040

JH1:

SaurJH1_1445

JH9:

SaurJH9_1418

JKD6008:

SAA6008_01321

JKD6159:

SAA6159_01222

LGA251:

SARLGA251_12660

M013:

M013TW_1303

MRSA252:

SAR1368

MSHR1132:

SAMSHR1132_12000

MSSA476:

SAS1296

Mu3:

SAHV_1344 (alsT)

Mu50:

SAV1356 (alsT)

MW2:

MW1243 (alsT)

RF122:

SAB1213

ST398:

SAPIG1358

T0131:

SAT0131_01427

TCH60:

HMPREF0772_11853 (agcS)

TW20:

SATW20_13570

USA300_TCH1516:

USA300HOU_1290 (alsT)

VC40:

SAVC_06025

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.307)

COL             MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSKFVQLRMLPEMFRALVE
N315            MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSKFVQLRMLPEMFRALVE
NCTC8325        MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSKFVQLRMLPEMFRALVE
Newman          MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSKFVQLRMLPEMFRALVE
USA300_FPR3757  MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSKFVQLRMLPEMFRALVE
                ************************************************************

COL             RPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWVIAFIGAASA
N315            RPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWVIAFIGAASA
NCTC8325        RPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWVIAFIGAASA
Newman          RPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWVIAFIGAASA
USA300_FPR3757  RPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWVIAFIGAASA
                ************************************************************

COL             FIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVFAILITITFAFVFNTVQSNTI
N315            FIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVFAILITITFAFVFNTVQSNTI
NCTC8325        FIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVFAILITITFAFVFNTVQSNTI
Newman          FIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVFAILITITFAFVFNTVQSNTI
USA300_FPR3757  FIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVFAILITITFAFVFNTVQSNTI
                ************************************************************

COL             AESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLSSLIVPIMAIIYIGMVLVILLFN
N315            AESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLSSLIVPIMAIIYIGMVLVILLFN
NCTC8325        AESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLSSLIVPIMAIIYIGMVLVILLFN
Newman          AESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLSSLIVPIMAIIYIGMVLVILLFN
USA300_FPR3757  AESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLSSLIVPIMAIIYIGMVLVILLFN
                ************************************************************

COL             LDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKRGLFSNEAGMGSAPNAAATAAVPHP
N315            LDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKRGLFSNEAGMGSAPNAAATAAVPHP
NCTC8325        LDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKRGLFSNEAGMGSAPNAAATAAVPHP
Newman          LDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKRGLFSNEAGMGSAPNAAATAAVPHP
USA300_FPR3757  LDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKRGLFSNEAGMGSAPNAAATAAVPHP
                ************************************************************

COL             VKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKFGDNAPQGVAVTQSALNEHLGSAGGIF
N315            VKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKFGDNAPQGVAVTQSALNEHLGSAGGIF
NCTC8325        VKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKFGDNAPQGVAVTQSALNEHLGSAGGIF
Newman          VKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKFGDNAPQGVAVTQSALNEHLGSAGGIF
USA300_FPR3757  VKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKFGDNAPQGVAVTQSALNEHLGSAGGIF
                ************************************************************

COL             LTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRVILFIFRCLVVVLVFVGAVVKTETVWNTA
N315            LTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRVILFIFRCLVVVLVFVGAVVKTETVWNTA
NCTC8325        LTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRVILFIFRCLVVVLVFVGAVVKTETVWNTA
Newman          LTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRVILFIFRCLVVVLVFVGAVVKTETVWNTA
USA300_FPR3757  LTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRVILFIFRCLVVVLVFVGAVVKTETVWNTA
                ************************************************************

COL             DLFMGLMAIVNIISIIGLSNVAFALMKDYQKQKKEGKNPVFKPENLEINLFGISAWGANK
N315            DLFMGLMAIVNIISIIGLSNVAFALMKDYQKQKKEGKNPVFKPENLEINLFGISAWGANK
NCTC8325        DLFMGLMAIVNIISIIGLSNVAFALMKDYQKQKKEGKNPVFKPENLEINLFGISAWGANK
Newman          DLFMGLMAIVNIISIIGLSNVAFALMKDYQKQKKEGKNPVFKPENLEINLFGISAWGANK
USA300_FPR3757  DLFMGLMAIVNIISIIGLSNVAFALMKDYQKQKKEGKNPVFKPENLEINLFGISAWGANK
                ************************************************************

COL             YKNSDKQIFLM
N315            YKNSDK-----
NCTC8325        YKNSDK-----
Newman          YKNSDK-----
USA300_FPR3757  YKNSDK-----
                ******

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]