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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003858000
- symbol?: dfrA
- synonym:
- description?: dihydrofolate reductase
- dihydrofolate reductase
- dihydrofolate reductase type 1 from Tn4003
- dihydrofolate reductase type I
- trimethoprim-sensitive dihydrofolate reductase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4139681..4140160
- synteny block?: BlockID0029140
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1380 (dfrA)
08BA02176:
C248_1466 (dfrB)
11819-97:
MS7_1382 (folA)
6850:
RSAU_001305 (dfrA)
71193:
ST398NM01_1427
ECT-R 2:
ECTR2_1282
ED133:
SAOV_1435c
ED98:
SAAV_1409 (folA)
HO 5096 0412:
SAEMRSA15_12890 (dfrB)
JH1:
SaurJH1_1515
JH9:
SaurJH9_1486
JKD6008:
SAA6008_01394 (dfrA)
JKD6159:
SAA6159_01293 (dfrA)
LGA251:
SARLGA251_13420 (dfrB)
M013:
M013TW_1372
MRSA252:
SAR1439 (dfrB)
MSHR1132:
SAMSHR1132_12680
MSSA476:
SAS1369
Mu3:
SAHV_1414 (dfrA)
Mu50:
SAV1426 (dfrA)
MW2:
MW1316 (dfrA)
RF122:
SAB1281c (dfrB)
ST398:
SAPIG1427 (folA)
T0131:
SAT0131_01506 (guaB)
TCH60:
HMPREF0772_11780 (folA)
TW20:
SATW20_14270 (dfrB)
USA300_TCH1516:
USA300HOU_1363 (dfrB)
VC40:
SAVC_06380
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRN
N315 MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRN
NCTC8325 MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRN
Newman MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRN
USA300_FPR3757 MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRN
************************************************************
COL VVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRG
N315 VVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRG
NCTC8325 VVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRG
Newman VVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRG
USA300_FPR3757 VVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRG
************************************************************
COL DTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
N315 DTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
NCTC8325 DTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
Newman DTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
USA300_FPR3757 DTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
***************************************