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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

Summary[edit | edit source]

  • pan ID?: SAUPAN004050000
  • symbol?: spcT
  • description?: MFS transporter

      descriptions from strain specific annotations:

    • MFS transporter
    • major facilitator family transporter
    • major facilitator superfamily protein
    • major facilitator transporter
    • MFS general substrate transporter
    • pseudogene
    • transporter, major facilitator superfamily mfs
  • strand?: -
  • coordinates?: 4333681..4341109
  • synteny block?: BlockID0030870
  • occurrence?: in 33% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1467 (spcT)
    08BA02176:
    11819-97:
    6850:
    71193:
    ECT-R 2:
    ECTR2_1361
    ED133:
    ED98:
    SAAV_1501
    HO 5096 0412:
    JH1:
    SaurJH1_1600
    JH9:
    SaurJH9_1568
    JKD6008:
    JKD6159:
    LGA251:
    M013:
    MRSA252:
    SAR1588
    MSHR1132:
    SAMSHR1132_13500
    MSSA476:
    Mu3:
    SAHV_1498
    Mu50:
    SAV1510
    MW2:
    RF122:
    ST398:
    T0131:
    TCH60:
    HMPREF0772_11630
    TW20:
    USA300_TCH1516:
    VC40:

Genome Viewer[edit | edit source]

Alignments[edit | edit source]

  • alignment of orthologues: