PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004081000
• symbol^?: accC
• synonym:
• description^?: acetyl-CoA carboxylase biotin carboxylase subunit

  descriptions from strain specific annotations:

  • acetyl-CoA carboxylase biotin carboxylase subunit
  • acetyl-CoA biotin carboxylase
  • acetyl-CoA carboxylase accC (biotin carboxylase subunit)
  • acetyl-CoA carboxylase, biotin carboxylase
  • acetyl-CoA carboxylase, biotin carboxylase subunit
  • Biotin carboxylase of acetyl-CoA carboxylase
  • biotin carboxylase subunit of acetyl-CoAcarboxylase
• strand^?: -
• coordinates^?: 4361868..4363226
• synteny block^?: BlockID0031130
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1571 (accC)
N315:
SA1357 (accC)
NCTC8325:
SAOUHSC_01623
Newman:
NWMN_1431 (accC)
USA300_FPR3757:
SAUSA300_1475 (accC)
04-02981:
SA2981_1485 (accC)
08BA02176:
C248_1569 (accC)
11819-97:
MS7_1544 (accC)
6850:
RSAU_001393 (accC1)
71193:
ST398NM01_1592
ECT-R 2:
ECTR2_1378 (accC)
ED133:
SAOV_1527
ED98:
SAAV_1519 (accC)
HO 5096 0412:
SAEMRSA15_14470 (accC)
JH1:
SaurJH1_1618
JH9:
SaurJH9_1585
JKD6008:
SAA6008_01496 (accC)
JKD6159:
SAA6159_01462 (accC)
LGA251:
SARLGA251_14330 (accC)
M013:
M013TW_1542
MRSA252:
SAR1604 (accC)
MSHR1132:
SAMSHR1132_13670
MSSA476:
SAS1465
Mu3:
SAHV_1514 (accC)
Mu50:
SAV1526 (accC)
MW2:
MW1479 (accC)
RF122:
SAB1399c (accC)
ST398:
SAPIG1592 (accC)
T0131:
SAT0131_01620
TCH60:
HMPREF0772_11614 (accC2)
TW20:
SATW20_15230 (accC)
USA300_TCH1516:
USA300HOU_1528 (accC)
VC40:
SAVC_06880

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTLSKDSYL
  N315            MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTLSKDSYL
  NCTC8325        MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTLSKDSYL
  Newman          MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTLSKDSYL
  USA300_FPR3757  MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTLSKDSYL
                  ************************************************************
  
  COL             NIPNILSIATSTGCDGVHPGYGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKA
  N315            NIPNILSIATSTGCDGVHPGYGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKA
  NCTC8325        NIPNILSIATSTGCDGVHPGYGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKA
  Newman          NIPNILSIATSTGCDGVHPGYGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKA
  USA300_FPR3757  NIPNILSIATSTGCDGVHPGYGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKA
                  ************************************************************
  
  COL             EMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATAGGGGKGIRVARDEKELETGF
  N315            EMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATAGGGGKGIRVARDEKELETGF
  NCTC8325        EMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATAGGGGKGIRVARDEKELETGF
  Newman          EMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATAGGGGKGIRVARDEKELETGF
  USA300_FPR3757  EMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATAGGGGKGIRVARDEKELETGF
                  ************************************************************
  
  COL             RMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDCTIQRRMQKLVEE
  N315            RMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDCTIQRRMQKLVEE
  NCTC8325        RMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDCTIQRRMQKLVEE
  Newman          RMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDCTIQRRMQKLVEE
  USA300_FPR3757  RMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDCTIQRRMQKLVEE
                  ************************************************************
  
  COL             APSPILDDETRREMGNAAVRAAKAVNYENAGTIEFIYDLNDNKFYFMEMNTRIQVEHPVT
  N315            APSPILDDETRREMGNAAVRAAKAVNYENAGTIEFIYDLNDNKFYFMEMNTRIQVEHPVT
  NCTC8325        APSPILDDETRREMGNAAVRAAKAVNYENAGTIEFIYDLNDNKFYFMEMNTRIQVEHPVT
  Newman          APSPILDDETRREMGNAAVRAAKAVNYENAGTIEFIYDLNDNKFYFMEMNTRIQVEHPVT
  USA300_FPR3757  APSPILDDETRREMGNAAVRAAKAVNYENAGTIEFIYDLNDNKFYFMEMNTRIQVEHPVT
                  ************************************************************
  
  COL             EMVTGIDLVKLQLQVAMGDVLPYKQEDIKLTGHAIEFRINAENPYKNFMPSPGKIEQYLA
  N315            EMVTGIDLVKLQLQVAMGDVLPYKQEDIKLTGHAIEFRINAENPYKNFMPSPGKIEQYLA
  NCTC8325        EMVTGIDLVKLQLQVAMGDVLPYKQEDIKLTGHAIEFRINAENPYKNFMPSPGKIEQYLA
  Newman          EMVTGIDLVKLQLQVAMGDVLPYKQEDIKLTGHAIEFRINAENPYKNFMPSPGKIEQYLA
  USA300_FPR3757  EMVTGIDLVKLQLQVAMGDVLPYKQEDIKLTGHAIEFRINAENPYKNFMPSPGKIEQYLA
                  ************************************************************
  
  COL             PGGYGVRIESACYTNYTIPPYYDSMVAKLIIHEPTRDEAIMAGIRALSEFVVLGIDTTIP
  N315            PGGYGVRIESACYTNYTIPPYYDSMVAKLIIHEPTRDEAIMAGIRALSEFVVLGIDTTIP
  NCTC8325        PGGYGVRIESACYTNYTIPPYYDSMVAKLIIHEPTRDEAIMAGIRALSEFVVLGIDTTIP
  Newman          PGGYGVRIESACYTNYTIPPYYDSMVAKLIIHEPTRDEAIMAGIRALSEFVVLGIDTTIP
  USA300_FPR3757  PGGYGVRIESACYTNYTIPPYYDSMVAKLIIHEPTRDEAIMAGIRALSEFVVLGIDTTIP
                  ************************************************************
  
  COL             FHIKLLNNDIFRSGKFNTNFLEQNSIMNDEG
  N315            FHIKLLNNDIFRSGKFNTNFLEQNSIMNDEG
  NCTC8325        FHIKLLNNDIFRSGKFNTNFLEQNSIMNDEG
  Newman          FHIKLLNNDIFRSGKFNTNFLEQNSIMNDEG
  USA300_FPR3757  FHIKLLNNDIFRSGKFNTNFLEQNSIMNDEG
                  *******************************