Pangenome04-0298108BA0217611819-97685071193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40

⊟Summary[edit | edit source]

pan ID^?: SAUPAN004098000
symbol^?: —
description^?: hypothetical protein
strand^?: -
coordinates^?: 4378492..4378875
synteny block^?: BlockID0031280
occurrence^?: in 27% of 33 strains

⊟Orthologs[edit | edit source]

COL:

SACOL1580

N315:

—

NCTC8325:

—

Newman:

—

USA300_FPR3757:

SAUSA300_1484

04-02981:

—

08BA02176:

—

11819-97:

—

6850:

—

71193:

—

ECT-R 2:

—

ED133:

—

ED98:

—

HO 5096 0412:

SAEMRSA15_12310

JH1:

—

JH9:

—

JKD6008:

SAA6008_02637

JKD6159:

—

LGA251:

—

M013:

—

MRSA252:

SAR1294

MSHR1132:

SAMSHR1132_15290

MSSA476:

—

Mu3:

—

Mu50:

—

MW2:

—

RF122:

—

ST398:

—

T0131:

SAT0131_02812

TCH60:

—

TW20:

SATW20_27190

USA300_TCH1516:

USA300HOU_0632

VC40:

—

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.307)

COL             MDKKAYNLKRTFEQPIVMYEFTDKFRINKGFRLDFWATFLIVWFILFLLFWYLLQPVIMS
USA300_FPR3757  MDKKAYNLKRTFEQPIVMYEFTDKFRINKGFRLDFWATFLIVWFILFLLFWYLLQPVIMS
                ************************************************************

COL             IGGLMFIYFTVAPYYITKYIVKLKQDGKKLFFFLWDFVIFVFNVQLRKVKLSYDEEVEYH
USA300_FPR3757  IGGLMFIYFTVAPYYITKYIVKLKQDGKKLFFFLWDFVIFVFNVQLRKVKLSYDEEVEYH
                ************************************************************

COL             DKKITFK
USA300_FPR3757  DKKITFK
                *******

Contents

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

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COL chromosome
USA300_FPR3757 chromosome