Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004120000
- symbol?: comGD
- synonym:
- description?: competence protein ComGD
- competence protein ComGD
- prepilin-type cleavage/methylation domain-containing protein
- competence protein ComGD, putative
- type II secretion system protein
- ComG operon competence protein, putative
- ComG operon protein 4
- exported protein
- Late competence protein ComGD, access of DNA to ComEA
- prepilin-type N-terminal cleavage/methylation domain-containing protein
- Type II secretory pathway, pseudopilin PulG
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4393180..4393584
- synteny block?: BlockID0031500
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1499 (comGD)
08BA02176:
C248_1584
11819-97:
MS7_1558
6850:
RSAU_001406 (comGD)
71193:
ST398NM01_1606
ECT-R 2:
ECTR2_1392
ED133:
SAOV_1541
ED98:
SAAV_1533
HO 5096 0412:
SAEMRSA15_14610
JH1:
SaurJH1_1633
JH9:
SaurJH9_1599
JKD6008:
SAA6008_01511 (pulG)
JKD6159:
SAA6159_01476 (pulG)
LGA251:
SARLGA251_14470
M013:
M013TW_1556
MRSA252:
SAR1618
MSHR1132:
SAMSHR1132_13820
MSSA476:
SAS1479
Mu3:
SAHV_1528
Mu50:
SAV1541
MW2:
MW1493
RF122:
SAB1413c
ST398:
SAPIG1606
T0131:
SAT0131_01635
TCH60:
HMPREF0772_11600 (comGD)
TW20:
SATW20_15370
USA300_TCH1516:
USA300HOU_1543 (pulG)
VC40:
SAVC_06950
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEKQLQIRKQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVIDDEANIISFITELNYI
N315 ----MQIRKQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVIDDEANIISFITELNYI
NCTC8325 MEKQLQIRKQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVIDDEANIISFITELNYI
Newman MEKQLQIRKQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVIDDEANIISFITELNYI
USA300_FPR3757 MEKQLQIRKQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVIDDEANIISFITELNYI
:*******************************************************
COL KSQAIANQGYINVRFYENSDTIKVIENNKIRFLKLKVGKIINVAKVDIIAFDKKGNINKF
N315 KSQAIANQGYINVRFYENSDTIKVIENNKIRFLKLKVGKIINVAKVDIIAFDKKGNINKF
NCTC8325 KSQAIANQGYINVRFYENSDTIKVIENNKIRFLKLKVGKIINVAKVDIIAFDKKGNINKF
Newman KSQAIANQGYINVRFYENSDTIKVIENNKIRFLKLKVGKIINVAKVDIIAFDKKGNINKF
USA300_FPR3757 KSQAIANQGYINVRFYENSDTIKVIENNNIRFLKLKVGKIINVAKVDIIAFDKKGNINKF
****************************:*******************************
COL GSITIYNNNSIYRIIFHIEKGRIRYEKL
N315 GSITIDNNNSIYRIIFHIEKGRIRYEKL
NCTC8325 GSITIYNNNSIYRIIFHIEKGRIRYEKL
Newman GSITIYNNNSIYRIIFHIEKGRIRYEKL
USA300_FPR3757 GSITIYNNNSIYRIIFHIEKGRIRYEKL
***** **********************