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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004140000
- symbol?: —
- synonym:
- description?: Nif3-like dinuclear metal center hexameric protein
- Nif3-like dinuclear metal center hexameric protein
- NIF3 (NGG1p interacting factor 3) family protein
- NIF3-like protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4408261..4409361
- synteny block?: BlockID0031700
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1517
08BA02176:
C248_1602
11819-97:
MS7_1576
6850:
RSAU_001424
71193:
ST398NM01_1624
ECT-R 2:
ECTR2_1409
ED133:
SAOV_1559
ED98:
SAAV_1551
HO 5096 0412:
SAEMRSA15_14790
JH1:
SaurJH1_1651
JH9:
SaurJH9_1617
JKD6008:
SAA6008_01528
JKD6159:
SAA6159_01494
LGA251:
SARLGA251_14650
M013:
M013TW_1574
MRSA252:
SAR1636
MSHR1132:
SAMSHR1132_13990
MSSA476:
SAS1497
Mu3:
SAHV_1546
Mu50:
SAV1559
MW2:
MW1511
RF122:
SAB1431c
ST398:
SAPIG1624
T0131:
SAT0131_01653 (prs)
TCH60:
HMPREF0772_11581
TW20:
SATW20_15550
USA300_TCH1516:
USA300HOU_1561
VC40:
SAVC_07045
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNT
N315 MKIADLMTLLDHHVPFSTAESWDNVGLLIGDGDVEVTGVLTALDCTLEVVNEAIEKGYNT
NCTC8325 MKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNT
Newman MKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNT
USA300_FPR3757 MKIADLMTLLDHHVPFSTAESWDNVGLLIGDEDVEVTGVLTALDCTLEVVNEAIEKGYNT
******************************* ****************************
COL IISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKN
N315 IISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKN
NCTC8325 IISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKN
Newman IISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKN
USA300_FPR3757 IISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKN
************************************************************
COL ISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGNYEYCFFESEGRGQFKPVGEA
N315 ISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGNYEYCFFESEGRGQFKPVGEA
NCTC8325 ISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGNYEYCFFESEGRGQFKPVGEA
Newman ISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGNYEYCFFESEGRGQFKPVGEA
USA300_FPR3757 ISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGNYEYCFFESEGRGQFKPVGEA
************************************************************
COL NPTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
N315 NPTIGQIDKIEDVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
NCTC8325 NPTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
Newman NPTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
USA300_FPR3757 NPTIGQIDKIEYVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
*********** ************************************************
COL MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADV
N315 MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADV
NCTC8325 MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADV
Newman MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADV
USA300_FPR3757 MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADV
************************************************************
COL FVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKEGLKALLMNWFNTEKINLDVEASTINT
N315 FVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKEGLKTLLMNWFNIEKINIDVEASTINT
NCTC8325 FVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKEGLKALLMNWFNTEKINLDVEASTINT
Newman FVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKEGLKALLMNWFNTEKINLDVEASTINT
USA300_FPR3757 FVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKEGLKALLMNWFNTEKINLDVEASTINT
*************************************:******* ****:*********
COL DPFQYI
N315 DPFQYI
NCTC8325 DPFQYI
Newman DPFQYI
USA300_FPR3757 DPFQYI
******