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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004157000
- symbol?: —
- synonym:
- description?: ClpP class membrane-bound serine protease, putative
- ClpP class membrane-bound serine protease, putative
- Nodulation efficiency protein D (NfeD)
- membrane-bound serine protease
- membrane protein
- nfeD-like family protein
- transporter
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4422640..4423323
- synteny block?: BlockID0031870
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1532
08BA02176:
C248_1617
11819-97:
MS7_1591
6850:
RSAU_001439 (yqeZ)
71193:
ST398NM01_1640
ECT-R 2:
ECTR2_1424
ED133:
SAOV_1574
ED98:
SAAV_1566
HO 5096 0412:
SAEMRSA15_14940
JH1:
SaurJH1_1666
JH9:
SaurJH9_1632
JKD6008:
SAA6008_01544
JKD6159:
SAA6159_01509
LGA251:
SARLGA251_14800
M013:
M013TW_1589
MRSA252:
SAR1651
MSHR1132:
SAMSHR1132_14140
MSSA476:
SAS1512
Mu3:
SAHV_1561
Mu50:
SAV1574
MW2:
MW1526
RF122:
SAB1446c
ST398:
SAPIG1640
T0131:
SAT0131_01670 (folB)
TCH60:
HMPREF0772_11566
TW20:
SATW20_15700
USA300_TCH1516:
USA300HOU_1575
VC40:
SAVC_07120
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSYNNFLQMTTILESTAGDTWVEQVSNIIVQPIFTLILTCLTFLGFVYQLYSKKINAAGI
N315 MSYNNFLQMTTILESTAGDTWVEQVSNIIVQPIFTLILTCLTFLGFVYQLYSKKINAAGI
NCTC8325 --------MTTILESTAGDTWVEQVSNIIVQPIFTLILTCLTFLGFVYQLYSKKINAAGI
Newman MSYNNFLQMTTILESTAGDTWVEQVSNIIVQPIFTLILTCLTFLGFVYQLYSKKINAAGI
USA300_FPR3757 --------MTTILESTAGDTWVEQVSNIIVQPIFTLILTCLTFLGFVYQLYSKKINAAGI
****************************************************
COL IATLSLLILFLGFLIQGNVNMHSILIFSIGVILVVIELFVVGAVIGIIGMILITISITTL
N315 IATLSLLILFLGFLIQGNVNMHSILIFSIGVILVVIELFVVGAVIGIIGMILITINITTL
NCTC8325 IATLSLLILFLGFLIQGNVNMHSILIFSIGVILVVIELFVVGAVIGIIGMILITISITTL
Newman IATLSLLILFLGFLIQGNVNMHSILIFSIGVILVVIELFVVGAVIGIIGMILITISITTL
USA300_FPR3757 IATLSLLILFLGFLIQGNVNMHSILIFSIGVILVVIELFVVGAVIGIIGMILITISITTL
*******************************************************.****
COL GDNLLFMLANVIVALILTIVEWVILVKIFNRKIPFLDKVILKDSTNSESGYNSHDNRSHL
N315 GDNLLFMLANVIVALILTIVEWVILVKIFNRKIPFLDKVILKDSTNSESGYNSHDNRSHL
NCTC8325 GDNLLFMLANVIVALILTIVEWVILVKIFNRKIPFLDKVILKDSTNSESGYNSHDNRSHL
Newman GDNLLFMLANVIVALILTIVEWVILVKIFNRKIPFLDKVILKDSTNSESGYNSHDNRSHL
USA300_FPR3757 GDNLLFMLANVIVALILTIVEWVILVKIFNRKIPFLDKVILKDSTNSESGYNSHDNRSHL
************************************************************
COL VGKTAQTVTDLRPAGIIFCENERIDAVSDGNFILRNKTVKILEVEGTRVVVREVD
N315 VGKTAQTVTDLRPAGIIFCENERIDAVSDGNFILRNKTVKILEVEGTRVVVREVD
NCTC8325 VGKTAQTVTDLRPAGIIFCENERIDAVSDGNFILRNKTVKILEVEGTRVVVREVD
Newman VGKTAQTVTDLRPAGIIFCENERIDAVSDGNFILRNKTVKILEVEGTRVVVREVD
USA300_FPR3757 VGKTAQTVTDLRPAGIIFCENERIDAVSDGNFILRNKTVKILEVEGTRVVVREVD
*******************************************************