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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004159000
- symbol?: mtaB
- synonym:
- description?: tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
- tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
- 2-methylthioadenine synthetase, putative
- Adenine synthetase
- MiaB family protein, possibly involved in tRNA or rRNA modification
- MiaB family RNA modification protein
- radical SAM domain-containing protein
- radical SAM methylthiotransferase, MiaB/RimO family protein
- RNA modification enzyme, MiaB family protein
- RNA modification protein
- tRNA 2-methylthioadenosine synthase-like protein
- tRNA-I(6)A37 thiotransferase enzyme MiaB
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4424134..4425480
- synteny block?: BlockID0031890
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1534
08BA02176:
C248_1619
11819-97:
MS7_1593
6850:
RSAU_001441
71193:
ST398NM01_1642
ECT-R 2:
ECTR2_1426
ED133:
SAOV_1576
ED98:
SAAV_1568
HO 5096 0412:
SAEMRSA15_14960
JH1:
SaurJH1_1668
JH9:
SaurJH9_1634
JKD6008:
SAA6008_01546
JKD6159:
SAA6159_01511
LGA251:
SARLGA251_14820
M013:
M013TW_1591
MRSA252:
SAR1653
MSHR1132:
SAMSHR1132_14160
MSSA476:
SAS1514
Mu3:
SAHV_1563
Mu50:
SAV1576
MW2:
MW1528
RF122:
SAB1448c
ST398:
SAPIG1642
T0131:
SAT0131_01672 (lysS)
TCH60:
HMPREF0772_11564 (miaB)
TW20:
SATW20_15720
USA300_TCH1516:
USA300HOU_1577
VC40:
SAVC_07130
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSTVAFHTLGCKVNHYETEAIWQLFKEANYERVDFEANADVFVINTCTVTNTGDKKSRQI
N315 MSTVAFHTLGCKVNHYETEAIWQLFKEANYERVDFEANADVFVINTCTVTNTGDKKSRQI
NCTC8325 MSTVAFHTLGCKVNHYETEAIWQLFKEANYERVDFEANADVFVINTCTVTNTGDKKSRQI
Newman MSTVAFHTLGCKVNHYETEAIWQLFKEANYERVDFEANADVFVINTCTVTNTGDKKSRQI
USA300_FPR3757 MSTVAFHTLGCKVNHYETEAIWQLFKEANYERVDFEANADVFVINTCTVTNTGDKKSRQI
************************************************************
COL IRRAIRQNPDAVICVTGCYAQTSSAEIMEIPGVDVVVGTQDRHKLLGYIDEFRKERQPIN
N315 IRRAIRQNPDAVICVTGCYAQTSSAEIMEIPGVDVVVGTQDRHKLLGYIDEFRKERQPIN
NCTC8325 IRRAIRQNPDAVICVTGCYAQTSSAEIMEIPGVDVVVGTQDRHKLLGYIDEFRKERQPIN
Newman IRRAIRQNPDAVICVTGCYAQTSSAEIMEIPGVDVVVGTQDRHKLLGYIDEFRKERQPIN
USA300_FPR3757 IRRAIRQNPDAVICVTGCYAQTSSAEIMEIPGVDVVVGTQDRHKLLGYIDEFRKERQPIN
************************************************************
COL GVGNIMKNRKYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQ
N315 GVGNIMKNRKYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQ
NCTC8325 GVGNIMKNRKYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQ
Newman GVGNIMKNRKYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQ
USA300_FPR3757 GVGNIMKNRKYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQ
************************************************************
COL ATQLVNSGYKEIVLTGIHTGGYGQDLKDYNLAQLLRDLETINGLERIRISSIEASQLTDE
N315 ATQLVNSGYKEIVLTGIHTGGYGQDLKDYNLAQLLRDLETINGLERIRISSIEASQLTDE
NCTC8325 ATQLVNSGYKEIVLTGIHTGGYGQDLKDYNLAQLLRDLETINGLERIRISSIEASQLTDE
Newman ATQLVNSGYKEIVLTGIHTGGYGQDLKDYNLAQLLRDLETINGLERIRISSIEASQLTDE
USA300_FPR3757 ATQLVNSGYKEIVLTGIHTGGYGQDLKDYNLAQLLRDLETINGLERIRISSIEASQLTDE
************************************************************
COL VIDVLERSTKVVRHLHIPLQSGSDTVLKRMRRKYTMDRFSERLTKLHKALPDLAVTSDVI
N315 VIDVLERSTKVVRHLHIPLQSGSDTVLKRMRRKYTMDRFSERLTKLHKALPDLAVTSDVI
NCTC8325 VIDVLERSTKVVRHLHIPLQSGSDTVLKRMRRKYTMDRFSERLTKLHKALPDLAVTSDVI
Newman VIDVLERSTKVVRHLHIPLQSGSDTVLKRMRRKYTMDRFSERLTKLHKALPDLAVTSDVI
USA300_FPR3757 VIDVLERSTKVVRHLHIPLQSGSDTVLKRMRRKYTMDRFSERLTKLHKALPDLAVTSDVI
************************************************************
COL VGFPGETEAEFQETYDFIVKHKFSELHVFPYSPRIGTPAARMDDQIDEEIKNERVHKLIT
N315 VGFPGETEAEFQETYDFIVKHKFSELHVFPYSPRIGTPAARMDDQIDEEIKNERVHKLIT
NCTC8325 VGFPGETEAEFQETYDFIVKHKFSELHVFPYSPRIGTPAARMDDQIDEEIKNERVHKLIT
Newman VGFPGETEAEFQETYDFIVKHKFSELHVFPYSPRIGTPAARMDDQIDEEIKNERVHKLIT
USA300_FPR3757 VGFPGETEAEFQETYDFIVKHKFSELHVFPYSPRIGTPAARMDDQIDEEIKNERVHKLIT
************************************************************
COL LSNQLGKLYASKFDQDVLEVIPEEQGDTEGTLVGYADNYMKVQFEGDESLIGQIVKVKIT
N315 LSNQLGKLYVSKFDQDVLEVIPEEQGDTEGTLVGYADNYMKVQFEGDESLIGQIVKVKIT
NCTC8325 LSNQLGKLYASKFDQDVLEVIPEEQGDTEGTLVGYADNYMKVQFEGDESLIGQIVKVKIT
Newman LSNQLGKLYASKFDQDVLEVIPEEQGDTEGTLVGYADNYMKVQFEGDESLIGQIVKVKIT
USA300_FPR3757 LSNQLGKLYASKFDQDVLEVIPEEQGDTEGTLVGYADNYMKVQFEGDESLIGQIVKVKIT
*********.**************************************************
COL QANYPLNEGQAIKVVDFATNKSDREVLV
N315 QANYPLNEGQAIKVVDFATNKSDREVLV
NCTC8325 QANYPLNEGQAIKVVDFATNKSDREVLV
Newman QANYPLNEGQAIKVVDFATNKSDREVLV
USA300_FPR3757 QANYPLNEGQAIKVVDFATNKSDREVLV
****************************