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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004164000
- symbol?: grpE
- synonym:
- description?: heat shock protein GrpE
- heat shock protein GrpE
- nucleotide exchange factor GrpE
- GrpE protein (Hsp-70 cofactor)
- co-chaperone GrpE
- Grpe
- heat shock molecular chaperone protein
- protein grpE (HSP-70 cofactor)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4430365..4430991
- synteny block?: BlockID0031940
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1539 (grpE)
08BA02176:
C248_1624 (grpE)
11819-97:
MS7_1598 (grpE)
6850:
RSAU_001446 (grpE)
71193:
ST398NM01_1647
ECT-R 2:
ECTR2_1431
ED133:
SAOV_1581 (grpE)
ED98:
SAAV_1573 (grpE)
HO 5096 0412:
SAEMRSA15_15010 (grpE)
JH1:
SaurJH1_1673
JH9:
SaurJH9_1639
JKD6008:
SAA6008_01551 (grpE)
JKD6159:
SAA6159_01516 (grpE)
LGA251:
SARLGA251_14870 (grpE)
M013:
M013TW_1596
MRSA252:
SAR1658 (grpE)
MSHR1132:
SAMSHR1132_14210
MSSA476:
SAS1519
Mu3:
SAHV_1568 (grpE)
Mu50:
SAV1581 (grpE)
MW2:
MW1533 (grpE)
RF122:
SAB1453c (grpE)
ST398:
SAPIG1647 (grpE)
T0131:
SAT0131_01677
TCH60:
HMPREF0772_11559 (grpE)
TW20:
SATW20_15770 (grpE)
USA300_TCH1516:
USA300HOU_1582 (grpE)
VC40:
SAVC_07160
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTNKDESVKKNTESTVEETNVKQNIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD
N315 MTNKDESVEKNTESTVEETNIKQNIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD
NCTC8325 MTNKDESVEKNTESTVEETNVKQNIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD
Newman MTNKDESVEKNTESTVEETNVKQNIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD
USA300_FPR3757 MTNKDESVEKNTESTVEETNVKQNIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKD
********:***********:***************************************
COL QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA
N315 QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA
NCTC8325 QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA
Newman QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA
USA300_FPR3757 QKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA
************************************************************
COL LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFE
N315 LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFE
NCTC8325 LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFE
Newman LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFE
USA300_FPR3757 LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFE
************************************************************
COL SGEITQELQKGYKLKDRVLRPSMVKVNQ
N315 SGEITQELQKGYKLKDRVLRPSMVKVNQ
NCTC8325 SGEITQELQKGYKLKDRVLRPSMVKVNQ
Newman SGEITQELQKGYKLKDRVLRPSMVKVNQ
USA300_FPR3757 SGEITQELQKGYKLKDRVLRPSMVKVNQ
****************************