PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004203000
• symbol^?: —
• synonym:
• description^?: acetyl-CoA carboxylase biotin carboxyl carrier protein subunit

  descriptions from strain specific annotations:

  • acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
  • acetyl-CoA carboxylase, biotin carboxyl carrier protein
  • acetyl-CoA carboxylase, biotin carboxyl carrier protein, putative
  • putative biotin carboxyl carrier protein ofacetyl-CoA carboxylase
  • acetyl-CoA carboxylase
  • acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, Acc_B1
  • acetyl-CoA carboxylase biotin carboxyl carrier subunit
  • biotin/lipoyl attachment domain-containing protein
  • Biotin carboxyl carrier protein
  • biotin carboxyl carrier protein of acetyl-CoA carboxylase
  • biotin-requiring enzyme family protein
• strand^?: -
• coordinates^?: 4456877..4457336
• synteny block^?: BlockID0032310
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1662
N315:
SA1435
NCTC8325:
SAOUHSC_01710
Newman:
NWMN_1508 (accB)
USA300_FPR3757:
SAUSA300_1564 (accB)
04-02981:
SA2981_1565 (accB)
08BA02176:
C248_1649
11819-97:
MS7_1623
6850:
RSAU_001469 (accB2)
71193:
ST398NM01_1671
ECT-R 2:
ECTR2_1456
ED133:
SAOV_1605 (accB_1)
ED98:
SAAV_1599
HO 5096 0412:
SAEMRSA15_15250
JH1:
SaurJH1_1698
JH9:
SaurJH9_1664
JKD6008:
SAA6008_01577 (accB_1)
JKD6159:
SAA6159_01540 (accB_1)
LGA251:
SARLGA251_15100
M013:
M013TW_1626
MRSA252:
SAR1686
MSHR1132:
SAMSHR1132_14440
MSSA476:
SAS1543
Mu3:
SAHV_1594
Mu50:
SAV1607
MW2:
MW1557
RF122:
SAB1478c (accB)
ST398:
SAPIG1671
T0131:
SAT0131_01703 (rpoB)
TCH60:
HMPREF0772_11534 (accB)
TW20:
SATW20_16020
USA300_TCH1516:
USA300HOU_1607
VC40:
SAVC_07285

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNIEKIEQIIKLVKENDVKKFKYKNFEDEIEIDFTDLNHLAAHSNQSNQSMNNNDLTASK
  N315            MNIEKIEQIIKLVKENDVKKFKYKNFEDEIEIDFTDSNHLAAHSNQSNQSMNNNDLTASK
  NCTC8325        MNIEKIEQIIKLVKENDVKKFKYKNFEDEIEIDFTDSNHLAAHSNQSNQSMNNNDLTASK
  Newman          MNIEKIEQIIKLVKENDVKKFKYKNFEDEIEIDFTDSNHLAAHSNQSNQSMNNNDLTASK
  USA300_FPR3757  MNIEKIEQIIKLVKENDVKKFKYKNFEDEIEIDFTDSNHLAAHSNQSNQSMNNNDLTASK
                  ************************************ ***********************
  
  COL             ANDNSDVSTNDYHDIKSPMIGTFFLQDSKELTEPIVNVGDKVNKGDIIGYVEAMKVLNEV
  N315            ANDNSDVSTNDYHDIKSPMVGTFFLQDSKELTEPIVNVGDKVNKGDIIGYVEAMKVLNEV
  NCTC8325        ANDNSDVSTNDYHDIKSPMIGTFFLQDSKELTEPIVNVGDKVNKGDIIGYVEAMKVLNEV
  Newman          ANDNSDVSTNDYHDIKSPMIGTFFLQDSKELTEPIVNVGDKVNKGDIIGYVEAMKVLNEV
  USA300_FPR3757  ANDNSDVSTNDYHDIKSPMIGTFFLQDSKELTEPIVNVGDKVNKGDIIGYVEAMKVLNEV
                  *******************:****************************************
  
  COL             TTDVAGEITEIVADHGTNVEYDQVLVRIK
  N315            TTDVAGEITEIVADHGTNVEYDQVLVRIK
  NCTC8325        TTDVAGEITEIVADHGTNVEYDQVLVRIK
  Newman          TTDVAGEITEIVADHGTNVEYDQVLVRIK
  USA300_FPR3757  TTDVAGEITEIVADHGTNVEYDQVLVRIK
                  *****************************