PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004205000
• symbol^?: —
• synonym:
• description^?: allophanate hydrolase

  descriptions from strain specific annotations:

  • allophanate hydrolase
  • 5-oxoprolinase subunit PxpB
  • allophanate hydrolase subunit 1
  • allophanate hydrolase 2 subunit 1
  • allophanate hydrolase subunit 1 family protein
  • Kinase autophosphorylation inhibitor
• strand^?: -
• coordinates^?: 4458338..4459039
• synteny block^?: BlockID0032330
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1664
N315:
SA1437
NCTC8325:
SAOUHSC_01712
Newman:
NWMN_1510
USA300_FPR3757:
SAUSA300_1566
04-02981:
SA2981_1567
08BA02176:
C248_1651
11819-97:
MS7_1625
6850:
RSAU_001471
71193:
ST398NM01_1673
ECT-R 2:
ECTR2_1458
ED133:
SAOV_1607
ED98:
SAAV_1601
HO 5096 0412:
SAEMRSA15_15270
JH1:
SaurJH1_1700
JH9:
SaurJH9_1666
JKD6008:
SAA6008_01579
JKD6159:
SAA6159_01542
LGA251:
SARLGA251_15120
M013:
M013TW_1628
MRSA252:
SAR1688
MSHR1132:
SAMSHR1132_14460
MSSA476:
SAS1545
Mu3:
SAHV_1596
Mu50:
SAV1609
MW2:
MW1559
RF122:
SAB1480c
ST398:
SAPIG1673
T0131:
SAT0131_01705
TCH60:
HMPREF0772_11532 (dur1)
TW20:
SATW20_16040
USA300_TCH1516:
USA300HOU_1609
VC40:
SAVC_07295

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MDVRFINEQTIMIYFENKISEETYRNVTAMVRWIREKEILEIQDIVPSYRAVLIYFDEQA
  N315            MDVRFINEQTIMIYFENKISEETYRNVTAMVRWIREKEILEIQDIVPSYRAVLIYFDEQA
  NCTC8325        -----------MIYFENKISEETYRNVTAMVRWIREKEILEIQDIVPSYRAVLIYFDEQA
  Newman          MDVRFINEQTIMIYFENKISEETYRNVTAMVRWIREKEILEIQDIVPSYRAVLIYFDEQA
  USA300_FPR3757  -----------MIYFENKISEETYRNVTAMVRWIREKEILEIQDIVPSYRAVLIYFDEQA
                             *************************************************
  
  COL             ITSSKLIENLELNKFNEKNVHAVNQTNRIIKIPVQYGGTYGPDIEEVAKHNRITVEQVIE
  N315            ITSSKLIENLELNKFNEKNVHAVNQTNRIIKIPVQYGGTYGPDIEEVAKHNRITVEQVIE
  NCTC8325        ITSSKLIENLELNKFNEKNVHAVNQTNRIIKIPVQYGGTYGPDIEEVAKHNRITVEQVIE
  Newman          ITSSKLIENLELNKFNEKNVHAVNQTNRIIKIPVQYGGTYGPDIEEVAKHNRITVEQVIE
  USA300_FPR3757  ITSSKLIENLELNKFNEKNVHAVNQTNRIIKIPVQYGGTYGPDIEEVAKHNRITVEQVIE
                  ************************************************************
  
  COL             KHTSKPYLIYMLGFMPGFPYLGGLDEQLHTPRRNQPRLKIHAGSVGIANNQTGLYPSDSP
  N315            KHTSKPYLIYMLGFMPGFPYLGGLDEQLHTPRRNQPRLKIHAGSVGIANNQTGLYPSDSP
  NCTC8325        KHTSKPYLIYMLGFMPGFPYLGGLDEQLHTPRRNQPRLKIHAGSVGIANNQTGLYPSDSP
  Newman          KHTSKPYLIYMLGFMPGFPYLGGLDEQLHTPRRNQPRLKIHAGSVGIANNQTGLYPSDSP
  USA300_FPR3757  KHTSKPYLIYMLGFMPGFPYLGGLDEQLHTPRRNQPRLKIHAGSVGIANNQTGLYPSDSP
                  ************************************************************
  
  COL             GGWQIIGRTPLKVFSSEREPMSMYEAGEWIQFYAIDEQKFIQIERDISDGNFNVDDWVVI
  N315            GGWQIIGRTPLKVFSSEREPMSMYEAGEWIQFYAIDEQKFIQIERDISDGNFNVDDWVVI
  NCTC8325        GGWQIIGRTPLKVFSSEREPMSMYEAGEWIQFYAIDEQKFIQIERDISDGNFNVDDWVVI
  Newman          GGWQIIGRTPLKVFSSEREPMSMYEAGEWIQFYAIDEQKFIQIERDISDGNFNVDDWVVI
  USA300_FPR3757  GGWQIIGRTPLKVFSSEREPMSMYEAGEWIQFYAIDEQKFIQIERDISDGNFNVDDWVVI
                  ************************************************************
  
  COL             ENVN
  N315            ENVN
  NCTC8325        ENVN
  Newman          ENVN
  USA300_FPR3757  ENVN
                  ****