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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004206000
- symbol?: greA
- synonym:
- description?: transcription elongation factor GreA
- transcription elongation factor GreA
- transcription elongation factor greA (Transcript cleavage factor greA)(General stress protein 20M) (GSP20M)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4459409..4459885
- synteny block?: BlockID0032340
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1568 (greA)
08BA02176:
C248_1652 (greA)
11819-97:
MS7_1626 (greA)
6850:
RSAU_001472 (greA)
71193:
ST398NM01_1674
ECT-R 2:
ECTR2_1459 (greA)
ED133:
SAOV_1608 (greA)
ED98:
SAAV_1602 (greA)
HO 5096 0412:
SAEMRSA15_15280 (greA)
JH1:
SaurJH1_1701 (greA)
JH9:
SaurJH9_1667 (greA)
JKD6008:
SAA6008_01580 (greA)
JKD6159:
SAA6159_01543 (greA)
LGA251:
SARLGA251_15130 (greA)
M013:
M013TW_1629
MRSA252:
SAR1689 (greA)
MSHR1132:
SAMSHR1132_14470
MSSA476:
SAS1546 (greA)
Mu3:
SAHV_1597 (greA)
Mu50:
SAV1610 (greA)
MW2:
MW1560 (greA)
RF122:
SAB1481c (greA)
ST398:
SAPIG1674
T0131:
SAT0131_01707 (rpsL)
TCH60:
HMPREF0772_11531 (greA)
TW20:
SATW20_16050 (greA)
USA300_TCH1516:
USA300HOU_1610 (greA)
VC40:
SAVC_07300 (greA)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MENQKQYPMTQEGFEKLERELEELKTVKRPEVVEKIKVARSFGDLSENSEYDAAKDEQGF
N315 MENQKQYPMTQEGFEKLERELEELKTVKRPEVVEKIKVARSFGDLSENSEYDAAKDEQGF
NCTC8325 MENQKQYPMTQEGFEKLERELEELKTVKRPEVVEKIKVARSFGDLSENSEYDAAKDEQGF
Newman MENQKQYPMTQEGFEKLERELEELKTVKRPEVVEKIKVARSFGDLSENSEYDAAKDEQGF
USA300_FPR3757 MENQKQYPMTQEGFEKLERELEELKTVKRPEVVEKIKVARSFGDLSENSEYDAAKDEQGF
************************************************************
COL IEQDIQRIEHMLRNALIIEDTGDNNVVKIGKTVTFVELPGDEEESYQIVGSAESDAFNGK
N315 IEQDIQRIEHMLRNALIIEDTGDNNVVKIGKTVTFVELPGDEEESYQIVGSAESDAFNGK
NCTC8325 IEQDIQRIEHMLRNALIIEDTGDNNVVKIGKTVTFVELPGDEEESYQIVGSAESDAFNGK
Newman IEQDIQRIEHMLRNALIIEDTGDNNVVKIGKTVTFVELPGDEEESYQIVGSAESDAFNGK
USA300_FPR3757 IEQDIQRIEHMLRNALIIEDTGDNNVVKIGKTVTFVELPGDEEESYQIVGSAESDAFNGK
************************************************************
COL ISNESPMAKALIGKGLDDEVRVPLPNGGEMNVKIVNIQ
N315 ISNESPMAKALIGKGLDDEVRVPLPNGGEMNVKIVNIQ
NCTC8325 ISNESPMAKALIGKGLDDEVRVPLPNGGEMNVKIVNIQ
Newman ISNESPMAKALIGKGLDDEVRVPLPNGGEMNVKIVNIQ
USA300_FPR3757 ISNESPMAKALIGKGLDDEVRVPLPNGGEMNVKIVNIQ
**************************************