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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

Summary[edit | edit source]

  • pan ID?: SAUPAN004269000
  • symbol?: tnpC2
  • synonym:
  • description?: transposase

      descriptions from strain specific annotations:

    • transposase
    • transposase C for Tn554
    • Transposon transposase C, putative
    • Tn554 transposase C
    • transposase C 2
    • Transposase C for transposon Tn554
    • Transposase for transposon Tn554
    • transposition regulatory protein TnpC
  • strand?: -
  • coordinates?: 4510536..4510913
  • synteny block?: BlockID0032950
  • occurrence?: in 33% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    SA1482 (tnpC)
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1616 (tnpC)
    08BA02176:
    11819-97:
    6850:
    RSAU_001517
    71193:
    ECT-R 2:
    ED133:
    ED98:
    HO 5096 0412:
    JH1:
    SaurJH1_1749
    JH9:
    SaurJH9_1715
    JKD6008:
    SAA6008_01625 (tnpC_2)
    JKD6159:
    LGA251:
    M013:
    MRSA252:
    SAR1737 (tnpC2)
    MSHR1132:
    MSSA476:
    Mu3:
    SAHV_1644 (tnpC)
    Mu50:
    SAV1657 (tnpC)
    MW2:
    RF122:
    ST398:
    T0131:
    SAT0131_01758
    TCH60:
    TW20:
    SATW20_16500
    USA300_TCH1516:
    VC40:

Genome Viewer[edit | edit source]

Alignments[edit | edit source]

  • alignment of orthologues: