Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004499000
- symbol?: —
- synonym:
- description?: aldo/keto reductase
- aldo/keto reductase
- aldo/keto reductase family oxidoreductase
- aldo/keto reductase oxidoreductase
- aldo-keto reductase, putative
- oxidoreductase
- oxidoreductase of aldo/keto reductase family, subgroup 1
- 2,5-didehydrogluconate reductase
- 2,5-diketo-D-gluconate reductase
- 2,5-diketo-D-gluconic acid reductase A (2,5-DKGreductase A) (2,5-DKGR A) (25DKGR-A) (AKR5C)
- aldo/keto reductase family protein
- aldo-keto reductase family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4730933..4731786
- synteny block?: BlockID0034900
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1743
08BA02176:
C248_1832
11819-97:
MS7_1787
6850:
RSAU_001641
71193:
ST398NM01_1836
ECT-R 2:
ECTR2_1623
ED133:
SAOV_1769
ED98:
SAAV_1797
HO 5096 0412:
SAEMRSA15_16960
JH1:
SaurJH1_1875
JH9:
SaurJH9_1839
JKD6008:
SAA6008_01763
JKD6159:
SAA6159_01706
LGA251:
SARLGA251_16720
M013:
M013TW_1798
MRSA252:
SAR1868
MSHR1132:
SAMSHR1132_16330
MSSA476:
SAS1709
Mu3:
SAHV_1773
Mu50:
SAV1788
MW2:
MW1726
RF122:
SAB1643c
ST398:
SAPIG1836
T0131:
SAT0131_01902
TCH60:
HMPREF0772_11368 (dkgB)
TW20:
SATW20_17770
USA300_TCH1516:
USA300HOU_1775
VC40:
SAVC_08150
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEVKTFYNGNTMPQIGLGTFRVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIR
N315 MEVKTFYNGNTMPQIGLGTFRVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIR
NCTC8325 MEVKTFYNGNTMPQIGLGTFRVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIR
Newman MEVKTFYNGNTMPQIGLGTFRVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIR
USA300_FPR3757 MEVKTFYNGNTMPQIGLGTFRVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIR
************************************************************
COL AGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGTNEAVM
N315 AGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGTNEAVM
NCTC8325 AGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGTNEAVM
Newman AGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGTNEAVM
USA300_FPR3757 AGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGTNEAVM
************************************************************
COL VDTWKGMEDLYKNNNVKNIGVSNFEPEHLEALLAQVSIKPVINQVEYHPYLTQHKLKLYL
N315 VDTWKGMEDLYKNNKAKNIGVSNFEPEHLEALLAQVSIKPVINQVEYHPYLTQHKLKLYL
NCTC8325 VDTWKGMEDLYKNNNVKNIGVSNFEPEHLEALLAQVSIKPVINQVEYHPYLTQHKLKLYL
Newman VDTWKGMEDLYKNNNVKNIGVSNFEPEHLEALLAQVSIKPVINQVEYHPYLTQHKLKLYL
USA300_FPR3757 VDTWKGMEDLYKNNNVKNIGVSNFEPEHLEALLAQVSIKPVINQVEYHPYLTQHKLKLYL
**************:.********************************************
COL AAQRIVMESWSPLMNAQILNDETIKDIAQELGKSPAQVVLRWNVQHAVVTIPKSVTPNRI
N315 AAQHIVMESWSPLMNAQILNDETIKDIAQELGKSPAQVVLRWNVQHGVVIIPKSVTPNRI
NCTC8325 AAQRIVMESWSPLMNAQILNDETIKDIAQELGKSPAQVVLRWNVQHAVVTIPKSVTPNRI
Newman AAQRIVMESWSPLMNAQILNDETIKDIAQELGKSPAQVVLRWNVQHAVVTIPKSVTPNRI
USA300_FPR3757 AAQRIVMESWSPLMNAQILNDETIKDIAQELGKSPAQVVLRWNVQHAVVTIPKSVTPNRI
***:******************************************.** **********
COL SENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKKFEG
N315 SENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKTFEG
NCTC8325 SENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKKFEG
Newman SENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKKFEG
USA300_FPR3757 SENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKKFEG
*********************************.***