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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004520000
- symbol?: —
- synonym:
- description?: hypothetical protein
- strand?: +
- coordinates?: 4745373..4746144
- synteny block?: BlockID0035110
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1758
08BA02176:
C248_1847
11819-97:
MS7_1801
6850:
RSAU_001655
71193:
ST398NM01_1871
ECT-R 2:
ECTR2_1637
ED133:
SAOV_1783
ED98:
SAAV_1812
HO 5096 0412:
SAEMRSA15_17100
JH1:
SaurJH1_1889
JH9:
SaurJH9_1853
JKD6008:
SAA6008_01778
JKD6159:
SAA6159_01720
LGA251:
—
M013:
M013TW_1812
MRSA252:
SAR1883
MSHR1132:
SAMSHR1132_16470
MSSA476:
SAS1723
Mu3:
SAHV_1788
Mu50:
SAV1803
MW2:
MW1741
RF122:
SAB1657
ST398:
SAPIG1871
T0131:
SAT0131_01919
TCH60:
HMPREF0772_11354
TW20:
SATW20_17920
USA300_TCH1516:
USA300HOU_1790
VC40:
SAVC_08225
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEKNEYIAKYNEYSQLLDATYSQAVAYLLSKYGAVTDDYYKEKSYTRFLNGEIKSISKGK
N315 MEKNEYTAKYNEYSQLLDATYSQAVAYLLNKYGAVTDDYYKEKSYTRFLNGEIKSISKGK
NCTC8325 MEKNEYIAKYNEYSQLLDATYSQAVAYLLSKYGAVTDDYYKEKSYTRFLNGEIKSISKGK
Newman MEKNEYIAKYNEYSQLLDATYSQAVAYLLSKYGAVTDDYYKEKSYTRFLNGEIKSISKGK
USA300_FPR3757 MEKNEYIAKYNEYSQLLDATYSQAVAYLLSKYGAVTDDYYKEKSYTRFLNGEIKSISKGK
****** **********************.******************************
COL YTRASEGLYCHHISEDKFQNLSDLRFISKFKYSYDVQKKENLVYCDLIEHLILHAIITKE
N315 YTRASEGLYCHHISEDKFQNLSDLRFISEFKYSYNVQKKENLVYCDLIEHLILHAIITKE
NCTC8325 YTRASEGLYCHHISEDKFQNLSDLRFISKFKYSYDVQKKENLVYCDLIEHLILHAIITKE
Newman YTRASEGLYCHHISEDKFQNLSDLRFISKFKYSYDVQKKENLVYCDLIEHLILHAIITKE
USA300_FPR3757 YTRASEGLYCHHISEDKFQNLSDLRFISKFKYSYDVQKKENLVYCDLIEHLILHAIITKE
****************************:*****:*************************
COL SHGQFGVAGLCQMIKPTVIDWYIGEYNPKPAWMQATKARAYLPGILVEKLLIKIDDMLKG
N315 SNGQFGVAGLCQMIKPTVIDWYISEYTPKPAWMQATKARAYLPRILVEKLLIKIDDMLEG
NCTC8325 SHGQFGVAGLCQMIKPTVIDWYIGEYNPKPAWMQATKARAYLPGILVEKLLIKIDDMLKG
Newman SHGQFGVAGLCQMIKPTVIDWYIGEYNPKPAWMQATKARAYLPGILVEKLLIKIDDMLKG
USA300_FPR3757 SHGQFGVAGLCQMIKPTVIDWYIGEYNPKPAWMQATKARAYLPGILVEKLLIKIDDMLKG
*:*********************.**.**************** **************:*
COL IEI-------
N315 IEIYDFLESR
NCTC8325 IEI-------
Newman IEI-------
USA300_FPR3757 IEI-------
***