PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary[edit | edit source]

pan ID^?: SAUPAN004524000
symbol^?: truncated-SA
synonym:
description^?: integrase catalytic subunit
- integrase catalytic subunit
- pseudogene
- transposase
- transposase domain-containing protein
- truncated transposase
strand^?: -
coordinates^?: 4748506..4749075
synteny block^?: BlockID0035150
occurrence^?: in 27% of 33 strains

⊟Orthologs[edit | edit source]

COL:

—

N315:

SA1623 (truncated-SA)

NCTC8325:

—

Newman:

—

USA300_FPR3757:

—

04-02981:

SA2981_1759

08BA02176:

—

11819-97:

—

6850:

—

71193:

—

ECT-R 2:

ECTR2_1638

ED133:

—

ED98:

SAAV_1813

HO 5096 0412:

SAEMRSA15_17260

JH1:

SaurJH1_1890

JH9:

SaurJH9_1854

JKD6008:

—

JKD6159:

—

LGA251:

—

M013:

—

MRSA252:

—

MSHR1132:

—

MSSA476:

—

Mu3:

SAHV_1789

Mu50:

SAV1804

MW2:

—

RF122:

—

ST398:

—

T0131:

—

TCH60:

—

TW20:

—

USA300_TCH1516:

—

VC40:

—

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:

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⊟Summary[edit | edit source]

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