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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

Summary[edit | edit source]

  • pan ID?: SAUPAN004525000
  • symbol?:
  • synonym:
  • description?: IS3 family transposase

      descriptions from strain specific annotations:

    • IS3 family transposase
    • pseudogene
    • putative transposase
    • transposase
    • truncated transposase
  • strand?: -
  • coordinates?: 4749097..4749306
  • synteny block?: BlockID0035160
  • occurrence?: in 42% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1760
    08BA02176:
    C248_1851
    11819-97:
    6850:
    RSAU_001658
    71193:
    ST398NM01_1875
    ECT-R 2:
    ED133:
    ED98:
    HO 5096 0412:
    SAEMRSA15_17170
    JH1:
    JH9:
    SaurJH9_1855
    JKD6008:
    JKD6159:
    LGA251:
    M013:
    MRSA252:
    MSHR1132:
    MSSA476:
    SAS1727
    Mu3:
    SAHV_1790
    Mu50:
    SAV1805
    MW2:
    MW1745 (tnp)
    RF122:
    ST398:
    SAPIG1875
    T0131:
    TCH60:
    TW20:
    SATW20_17970
    USA300_TCH1516:
    VC40:
    SAVC_08250

Genome Viewer[edit | edit source]

Alignments[edit | edit source]

  • alignment of orthologues: