PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004566000
• symbol^?: splB
• synonym:
• description^?: serine protease SplB

  descriptions from strain specific annotations:

  • serine protease SplB
  • serine protease
  • peptidase S1 and S6, chymotrypsin/Hap
  • peptidase S1 and S6 chymotrypsin/Hap
  • serine proteinase
• strand^?: -
• coordinates^?: 4801491..4802213
• synteny block^?: BlockID0035550
• occurrence^?: in 70% of 33 strains

⊟Orthologs

COL:
SACOL1868 (splB)
N315:
SA1630 (splB)
NCTC8325:
SAOUHSC_01941
Newman:
NWMN_1705 (splB)
USA300_FPR3757:
SAUSA300_1757 (splB)
04-02981:
SA2981_1767 (splB)
08BA02176:
—
11819-97:
MS7_1813 (splB)
6850:
RSAU_001669 (splB)
71193:
—
ECT-R 2:
ECTR2_1644
ED133:
SAOV_1797
ED98:
SAAV_1820 (splB)
HO 5096 0412:
—
JH1:
SaurJH1_1898
JH9:
SaurJH9_1863
JKD6008:
—
JKD6159:
—
LGA251:
SARLGA251_16960 (splB)
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS1735
Mu3:
SAHV_1797 (splB)
Mu50:
SAV1812 (splB)
MW2:
MW1754 (splB)
RF122:
SAB1672c
ST398:
—
T0131:
SAT0131_01932
TCH60:
—
TW20:
SATW20_18100 (splB)
USA300_TCH1516:
USA300HOU_1805 (splB)
VC40:
SAVC_08300

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNKNVVIKSLAALTILTSVTGIGTTLVEEVQQTAKAENNVTKVKDTNIFPYTGVVAFKSA
  N315            MNKNVVIKSLATLTILTSVTGIGTTLVEEVQQTAKAENNVTKIQDTNIFPYTGVVAFKSA
  NCTC8325        MNKNVVIKSLAALTILTSVTGIGTTLVEEVQQTAKAENNVTKVKDTNIFPYTGVVAFKSA
  Newman          MNKNVVIKSLAALTILTSVTGIGTTLVEEVQQTAKAENNVTKVKDTNIFPYTGVVAFKSA
  USA300_FPR3757  MNKNVVIKSLAALTILTSVTGIGTTLVEEVQQTAKAENNVTKVKDTNIFPYTGVVAFKSA
                  ***********:******************************::****************
  
  COL             TGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVE
  N315            TGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVE
  NCTC8325        TGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVE
  Newman          TGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVE
  USA300_FPR3757  TGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVE
                  ************************************************************
  
  COL             ERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGS
  N315            ERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGS
  NCTC8325        ERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGS
  Newman          ERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGS
  USA300_FPR3757  ERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGS
                  ************************************************************
  
  COL             SIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK
  N315            SIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK
  NCTC8325        SIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK
  Newman          SIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK
  USA300_FPR3757  SIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK
                  ************************************************************