PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004572000
• symbol^?: epiG
• synonym:
• description^?: epidermin immunity protein F

  descriptions from strain specific annotations:

  • epidermin immunity protein F
  • lantibiotic ABC transporter protein
  • lantibiotic ABC transporter protein, putative
  • lantibiotic epidermin immunity protein F
  • lantibiotic immunity protein
  • putative lantibiotic ABC transporter protein
• strand^?: -
• coordinates^?: 4805058..4805756
• synteny block^?: BlockID0035600
• occurrence^?: in 45% of 33 strains

⊟Orthologs

COL:
SACOL1871 (epiG)
N315:
—
NCTC8325:
SAOUHSC_01945
Newman:
NWMN_1709 (bsaG)
USA300_FPR3757:
SAUSA300_1760 (epiG)
04-02981:
—
08BA02176:
—
11819-97:
MS7_1816
6850:
RSAU_001672
71193:
—
ECT-R 2:
—
ED133:
SAOV_1800
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
—
LGA251:
SARLGA251_16990
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS1739
Mu3:
—
Mu50:
—
MW2:
MW1758 (bsaG)
RF122:
SAB1676c
ST398:
—
T0131:
SAT0131_01936
TCH60:
—
TW20:
SATW20_18130
USA300_TCH1516:
USA300HOU_1808 (epiG)
VC40:
SAVC_08315

⊟Genome Viewer

COL
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             ----MIINELKSCKLKFSKQALTFVPIIVTILFILFINWYLNVNLWNGRQISLFTASFNA
  NCTC8325        ----MIINELKSCKLKFSKQALTFVPIIVTILFILFINWYLNVNLWNGRQISLFTASFNA
  Newman          MAIKMIINELKSCKLKFSKQALTFVPIIVTILFILFINWYLNVNLWNGRQISLFTASFNA
  USA300_FPR3757  ----MIINELKSCKLKFSKQALTFVPIIVTILFILFINWYLNVNLWNGRQISLFTASFNA
                      ********************************************************
  
  COL             ITSLLISINVYQVINFEENIGHFNHILGKANRLNWLNASMIFTYTITAICILLASINLLW
  NCTC8325        ITSLLISINVYQVINFEENIGHFNHILGKANRLNWLNASMIFTYTITAICILLASINLLW
  Newman          ITSLLISINVYQVINFEENIGHFNHILGKANRLNWLNASMIFTYTITAICILLASINLLW
  USA300_FPR3757  ITSLLISINVYQVINFEENIGHFNHILGKANRLNWLNASMIFTYTITAICILLASINLLW
                  ************************************************************
  
  COL             HSHDMKITLMFIGVSLFFNVIILLLLFIFSIFIKDVMAIVVGVLMFIFNVYFGLEVLGDH
  NCTC8325        HSHDMKITLMFIGVSLFFNVIILLLLFIFSIFIKDVMAIVVGVLMFIFNVYFGLEVLGDH
  Newman          HSHDMKITLMFIGVSLFFNVIILLLLFIFSIFIKDVMAIVVGVLMFIFNVYFGLEVLGDH
  USA300_FPR3757  HSHDMKITLMFIGVSLFFNVIILLLLFIFSIFIKDVMAIVVGVLMFIFNVYFGLEVLGDH
                  ************************************************************
  
  COL             SWFYLPITYATRYVYMFIEGSIPVTLTLAIYIIITLLLAVLLFKGFNKWSGRTIKD
  NCTC8325        SWFYLPITYATRYVYMFIEGSIPVTLTLAIYIIITLLLAVLLFKGFNKWSGRTIKD
  Newman          SWFYLPITYATRYVYMFIEGSIPVTLTLAIYIIITLLLAVLLFKGFNKWSGRTIKD
  USA300_FPR3757  SWFYLPITYATRYVYMFIEGSIPVTLTLAIYIIITLLLAVLLFKGFNKWSGRTIKD
                  ********************************************************