PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004585000
• symbol^?: epiA
• synonym:
• description^?: lantibiotic epidermin

  descriptions from strain specific annotations:

  • lantibiotic epidermin
  • gallidermin superfamily epiA protein
  • lantibiotic epidermin biosynthesis protein EpiA
  • lantibiotic epidermin precursor EpiA
  • lantibiotic precursor
  • Lantibiotic
  • lantibiotic epidermin EpiA
  • lantibiotic gallidermin
  • lantibiotic protein
• strand^?: -
• coordinates^?: 4824181..4824324
• synteny block^?: BlockID0035600
• occurrence^?: in 42% of 33 strains

⊟Orthologs

COL:
SACOL1878 (epiA)
N315:
—
NCTC8325:
SAOUHSC_01953
Newman:
NWMN_1716 (bsaA2)
USA300_FPR3757:
SAUSA300_1767 (epiA)
04-02981:
—
08BA02176:
—
11819-97:
MS7_1823 (gdmA)
6850:
—
71193:
—
ECT-R 2:
—
ED133:
SAOV_1807
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
—
LGA251:
SARLGA251_17060
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS1746
Mu3:
—
Mu50:
—
MW2:
MW1765 (bsaA2)
RF122:
SAB1683c
ST398:
—
T0131:
SAT0131_01944
TCH60:
—
TW20:
SATW20_18200
USA300_TCH1516:
USA300HOU_1815 (epiA)
VC40:
SAVC_08350

⊟Genome Viewer

COL
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MEKVLDLDVQVKANNNSNDSAGDERITSHSLCTPGCAKTGSFNSFCC
  NCTC8325        MEKVLDLDVQVKANNNSNDSAGDERITSHSLCTPGCAKTGSFNSFCC
  Newman          MEKVLDLDVQVKANNNSNDSAGDERITSHSLCTPGCAKTGSFNSFCC
  USA300_FPR3757  MEKVLDLDVQVKANNNSNDSAGDERITSHSLCTPGCAKTGSFNSFCC
                  ***********************************************