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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004795000
- symbol?: —
- synonym:
- description?: PTS transporter subunit IIC
- PTS transporter subunit IIC
- phosphotransferase system, EIIC
- Phosphotransferase system, IIC domain protein
- PTS system, IIC component
- PTS system transporter subunit IIC domain-containing protein
- membrane protein
- regulatory protein
- membrane spanning protein
- phosphotransferase system, EIIC family protein
- phosphotransferase system EIIC domain-containing protein
- PTS system transporter subunit IIC
- toxin regulatory protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5002801..5003862
- synteny block?: BlockID0037270
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1815 (pfoS/R)
08BA02176:
C248_1903
11819-97:
MS7_1864
6850:
RSAU_001718
71193:
ST398NM01_1925
ECT-R 2:
ECTR2_1701
ED133:
SAOV_1856
ED98:
SAAV_1878
HO 5096 0412:
SAEMRSA15_17640
JH1:
SaurJH1_1947
JH9:
SaurJH9_1913
JKD6008:
SAA6008_01816
JKD6159:
SAA6159_01788
LGA251:
SARLGA251_17420
M013:
M013TW_1865
MRSA252:
SAR1950
MSHR1132:
SAMSHR1132_17050
MSSA476:
SAS1782
Mu3:
SAHV_1844
Mu50:
SAV1859
MW2:
MW1800
RF122:
SAB1793c
ST398:
SAPIG1925
T0131:
SAT0131_01979
TCH60:
HMPREF0772_11285
TW20:
SATW20_18530
USA300_TCH1516:
USA300HOU_1854
VC40:
SAVC_08545
⊟Genome Viewer[edit | edit source]
COL | |
N315 | |
NCTC8325 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSNANNADNKQFFSKILNSIGAGVVIALVPNALLGEVLKIFKSGNEILELTYQLVILIQS
N315 MSNANNADNKQFFSKILNSIGAGVVIALVPNALLGEVLKIFKSGNEILELTYQLVILIQL
NCTC8325 MSNANNADNKQFFSKILNSIGAGVVIALVPNALLGEVLKIFKSGNEILELTYQLVILIQS
Newman MSNANNADNKQFFSKILNSIGAGVVIALVPNALLGEVLKIFKSGNEILELTYQLVILIQS
USA300_FPR3757 MSNANNADNKQFFSKILNSIGAGVVIALVPNALLGEVLKIFKSGNEILELTYQLVILIQS
***********************************************************
COL FMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSFMLKGIGDIINTSLVVIIA
N315 FMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSFMLKGIGDIINTSLVVIIA
NCTC8325 FMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSFMLKGIGDIINTSLVVIIA
Newman FMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSFMLKGIGDIINTSLVVIIA
USA300_FPR3757 FMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSFMLKGIGDIINTSLVVIIA
************************************************************
COL CLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPYIRKITQAIGNVIHSFTDLNPLLM
N315 CLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPYIRKITQAIGNVIHSFTDLNPLLM
NCTC8325 CLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPYIRKITQAIGNVIHSFTDLNPLLM
Newman CLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPYIRKITQAIGNVIHSFTDLNPLLM
USA300_FPR3757 CLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPYIRKITQAIGNVIHSFTDLNPLLM
************************************************************
COL SILISVAFSLLMVTPISLVAIATAISLNGLGSGAANLGIVAACVTFLFGSLRVNSIGVNA
N315 SILISVAFSLLMVTPISLVAIATAISLNGLGSGAANLGIVAACVTFLFGSLRVNSIGVNA
NCTC8325 SILISVAFSLLMVTPISLVAIATAISLNGLGSGAANLGIVAACVTFLFGSLRVNSIGVNA
Newman SILISVAFSLLMVTPISLVAIATAISLNGLGSGAANLGIVAACVTFLFGSLRVNSIGVNA
USA300_FPR3757 SILISVAFSLLMVTPISLVAIATAISLNGLGSGAANLGIVAACVTFLFGSLRVNSIGVNA
************************************************************
COL VLLIGAAKMMIPVYLKNLIISIPLTINGIITGIIAYVLQVKGTPLSAGFGYTGLVGPINA
N315 VLLIGAAKMMIPVYLKNLIISIPLTINGIITGIIAYVLQVKGTPLSAGFGYTGLVGPINA
NCTC8325 VLLIGAAKMMIPVYLKNLIISIPLTINGIITGIIAYVLQVKGTPLSAGFGYTGLVGPINA
Newman VLLIGAAKMMIPVYLKNLIISIPLTINGIITGIIAYVLQVKGTPLSAGFGYTGLVGPINA
USA300_FPR3757 VLLIGAAKMMIPVYLKNLIISIPLTINGIITGIIAYVLQVKGTPLSAGFGYTGLVGPINA
************************************************************
COL FNRMSGDPTMNIILLALGYFVIPFVSAFIVHELCKKFIPIYSNDIYKFEVPKQ
N315 FNRMSGDPTMNIILLALGYFVIPFVSAFIVHELCKKFIPIYSNDIYKFEVPKQ
NCTC8325 FNRMSGDPTMNIILLALGYFVIPFVSAFIVHELCKKFIPIYSNDIYKFEVPKQ
Newman FNRMSGDPTMNIILLALGYFVIPFVSAFIVHELCKKFIPIYSNDIYKFEVPKQ
USA300_FPR3757 FNRMSGDPTMNIILLALGYFVIPFVSAFIVHELCKKFIPIYSNDIYKFEVPKQ
*****************************************************