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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004847000
- symbol?: —
- synonym:
- description?: multidrug ABC transporter ATP-binding protein
- multidrug ABC transporter ATP-binding protein
- ABC transporter ATP-binding/permease
- ABC transporter ATP-binding protein
- ABC-type multidrug transport system, ATPase and permease component
- SAV1866 family putative multidrug efflux ABC transporter
- toxin exporting ABC transporter permease/ATP-binding protein
- Lipid A export ATP-binding/permease protein MsbA
- ABC superfamily ATP binding cassette transporter, membrane protein
- ABC transporter
- ATP-binding ABC transporter
- Lipid A export ATP-binding/permease MsbA
- multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein
- putative multidrug export ATP-binding/permease
- Putative multidrug export ATP-binding/permease protein
- toxin exporting ABC transporter, permease
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5054038..5055213
- synteny block?: BlockID0037770
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1822
08BA02176:
C248_1937
11819-97:
MS7_1901
6850:
RSAU_001753
71193:
ST398NM01_1959
ECT-R 2:
ECTR2_1737
ED133:
SAOV_1893
ED98:
SAAV_1916
HO 5096 0412:
SAEMRSA15_17730
JH1:
SaurJH1_1954
JH9:
SaurJH9_1920
JKD6008:
SAA6008_01823 (msbA)
JKD6159:
SAA6159_01797 (msbA)
LGA251:
SARLGA251_17480
M013:
M013TW_1900
MRSA252:
SAR1956
MSHR1132:
SAMSHR1132_17110
MSSA476:
SAS1788
Mu3:
SAHV_1851
Mu50:
SAV1866
MW2:
MW1806
RF122:
SAB1799c
ST398:
SAPIG1959
T0131:
SAT0131_01988
TCH60:
HMPREF0772_11278
TW20:
SATW20_18600
USA300_TCH1516:
USA300HOU_1861
VC40:
SAVC_08585
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLT
N315 MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLT
NCTC8325 MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLT
Newman MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLT
USA300_FPR3757 MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLT
************************************************************
COL IAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQV
N315 IAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQV
NCTC8325 IAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQV
Newman IAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQV
USA300_FPR3757 IAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQV
************************************************************
COL ISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYV
N315 ISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYV
NCTC8325 ISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYV
Newman ISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYV
USA300_FPR3757 ISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYV
************************************************************
COL FFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH
N315 FFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH
NCTC8325 FFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH
Newman FFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH
USA300_FPR3757 FFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH
************************************************************
COL TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVAS
N315 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVAS
NCTC8325 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVAS
Newman TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVAS
USA300_FPR3757 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVAS
************************************************************
COL FTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDI
N315 FTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDI
NCTC8325 FTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDI
Newman FTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDI
USA300_FPR3757 FTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDI
************************************************************
COL NLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLV
N315 NLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLV
NCTC8325 NLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLV
Newman NLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLV
USA300_FPR3757 NLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLV
************************************************************
COL QQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSG
N315 QQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSG
NCTC8325 QQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSG
Newman QQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSG
USA300_FPR3757 QQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSG
************************************************************
COL GQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTIT
N315 GQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTIT
NCTC8325 GQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTIT
Newman GQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTIT
USA300_FPR3757 GQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTIT
************************************************************
COL HADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQNL
N315 HADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQNL
NCTC8325 HADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQNL
Newman HADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQNL
USA300_FPR3757 HADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQNL
**************************************