PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004893000
• symbol^?: ampS
• synonym:
• description^?: aminopeptidase

  descriptions from strain specific annotations:

  • aminopeptidase
  • aminopeptidase PepS
  • aminopeptidase ampS
  • aminopeptidase S
  • Aminopeptidase S (Leu, Val, Phe, Tyr preference)
  • M29 family aminopeptidase
  • peptidase M29, aminopeptidase II
  • peptidase M29 aminopeptidase II
  • putative aminopeptidase
• strand^?: -
• coordinates^?: 5091261..5092451
• synteny block^?: BlockID0037990
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1937 (pepS)
N315:
SA1695 (ampS)
NCTC8325:
SAOUHSC_02092
Newman:
NWMN_1817 (pepS)
USA300_FPR3757:
SAUSA300_1860 (pepS)
04-02981:
SA2981_1835 (ampS)
08BA02176:
C248_1951
11819-97:
MS7_1914 (pepS)
6850:
RSAU_001766 (pepS)
71193:
ST398NM01_1972
ECT-R 2:
ECTR2_1750
ED133:
SAOV_1977
ED98:
SAAV_1944 (pepS)
HO 5096 0412:
SAEMRSA15_17860
JH1:
SaurJH1_1967
JH9:
SaurJH9_1933
JKD6008:
SAA6008_01899 (ampS)
JKD6159:
SAA6159_01810 (ampS)
LGA251:
SARLGA251_17610
M013:
M013TW_1915
MRSA252:
SAR1969
MSHR1132:
SAMSHR1132_17240
MSSA476:
SAS1801
Mu3:
SAHV_1864 (ampS)
Mu50:
SAV1879 (ampS)
MW2:
MW1819 (ampS)
RF122:
SAB1811c
ST398:
SAPIG1972
T0131:
SAT0131_02002 (hprK)
TCH60:
HMPREF0772_11265 (pepS)
TW20:
SATW20_18730
USA300_TCH1516:
USA300HOU_1874 (pepS)
VC40:
SAVC_08650

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MGILTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRV
  N315            ---MTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRV
  NCTC8325        MGILTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRV
  Newman          MGILTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRV
  USA300_FPR3757  ---MTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRV
                     :********************************************************
  
  COL             VYSDPTLKRLKFENESVEHFANHEIKSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQ
  N315            VYSDPTLKRLKFENESVEHFANHEIKSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQ
  NCTC8325        VYSDPTLKRLKFENESVEHFANHEIKSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQ
  Newman          VYSDPTLKRLKFENESVEHFANHEIKSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQ
  USA300_FPR3757  VYSDPTLKRLKFENESVEHFANHEIKSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQ
                  ************************************************************
  
  COL             KLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPELSVEEAYIKFIDEVFD
  N315            KLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPELSVEEAYIKFIDEVFD
  NCTC8325        KLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPELSVEEAYIKFIDEVFD
  Newman          KLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPELSVEEAYIKFIDEVFD
  USA300_FPR3757  KLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPELSVEEAYIKFIDEVFD
                  ************************************************************
  
  COL             IVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSY
  N315            IVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSY
  NCTC8325        IVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSY
  Newman          IVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSY
  USA300_FPR3757  IVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSY
                  ************************************************************
  
  COL             VNGKEQAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSA
  N315            VNGEEQAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSA
  NCTC8325        VNGKEQAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSA
  Newman          VNGKEQAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSA
  USA300_FPR3757  VNGKEQAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSA
                  ***:********************************************************
  
  COL             GKGEAVLKDLINTDEGSRRLGEVALVPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAF
  N315            EKGEAVLKDLINTDEGSRRLGEVALVPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAF
  NCTC8325        GKGEAVLKDLINTDEGSRRLGEVALVPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAF
  Newman          GKGEAVLKDLINTDEGSRRLGEVALVPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAF
  USA300_FPR3757  GKGEAVLKDLINTDEGSRRLGEVALVPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAF
                   ***********************************************************
  
  COL             NIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSKELVFENGNWASTF
  N315            NIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSKELVFENGNWASTF
  NCTC8325        NIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSKELVFENGNWASTF
  Newman          NIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSKELVFENGNWASTF
  USA300_FPR3757  NIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSKELVFENGNWASTF
                  **********************************************************