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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004896000
- symbol?: ptpA
- synonym:
- description?: protein-tyrosine-phosphatase
- protein-tyrosine-phosphatase
- low molecular weight phosphotyrosine protein phosphatase
- low molecular weight protein-tyrosine-phosphatase
- phosphotyrosine protein phosphatase
- low molecular weight protein-tyrosine-phosphatase ptpA
- low molecular weight phosphotyrosine protein phosphatase family protein
- low molecular weight protein-tyrosine-phosphatase yfkj (lmptp)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5092867..5093331
- synteny block?: BlockID0038020
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1837
08BA02176:
C248_1953
11819-97:
MS7_1916 (ptpA)
6850:
RSAU_001768 (ptpA)
71193:
ST398NM01_1974
ECT-R 2:
ECTR2_1752
ED133:
SAOV_1979
ED98:
SAAV_1946
HO 5096 0412:
SAEMRSA15_17880
JH1:
SaurJH1_1969
JH9:
SaurJH9_1935
JKD6008:
SAA6008_01901
JKD6159:
SAA6159_01812
LGA251:
SARLGA251_17630
M013:
M013TW_1917
MRSA252:
SAR1971
MSHR1132:
SAMSHR1132_17260
MSSA476:
SAS1803
Mu3:
SAHV_1866
Mu50:
SAV1881
MW2:
MW1821
RF122:
SAB1813
ST398:
SAPIG1974
T0131:
SAT0131_02005
TCH60:
HMPREF0772_11263 (ptpA)
TW20:
SATW20_18750
USA300_TCH1516:
USA300HOU_1877
VC40:
SAVC_08660
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEPPHEGTQKILNK
N315 MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEPPHEGTQKILNK
NCTC8325 MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEPPHEGTQKILNK
Newman MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEPPHEGTQKILNK
USA300_FPR3757 MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEPPHEGTQKILNK
************************************************************
COL HNIPFDGMISELFEATDDFDYIVAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEESDVPD
N315 HNIPFDGMISELFEATDDFDYIVAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEESDVPD
NCTC8325 HNIPFDGMISELFEATDDFDYIVAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEESDVPD
Newman HNIPFDGMISELFEATDDFDYIVAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEESDVPD
USA300_FPR3757 HNIPFDGMISELFEATDDFDYIVAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEESDVPD
************************************************************
COL PYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG
N315 PYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG
NCTC8325 PYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG
Newman PYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG
USA300_FPR3757 PYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG
**********************************