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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004974000
- symbol?: —
- synonym:
- description?: DUF4097 family beta strand repeat protein
- DUF4097 family beta strand repeat protein
- exported protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5162013..5162630
- synteny block?: BlockID0038720
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1884
08BA02176:
C248_2013
11819-97:
MS7_1961
6850:
RSAU_001821
71193:
ST398NM01_2029
ECT-R 2:
ECTR2_1798
ED133:
SAOV_2028
ED98:
SAAV_1993
HO 5096 0412:
SAEMRSA15_18420
JH1:
SaurJH1_2016
JH9:
SaurJH9_1983
JKD6008:
SAA6008_01947
JKD6159:
SAA6159_01857
LGA251:
SARLGA251_18100
M013:
M013TW_1963
MRSA252:
SAR2018
MSHR1132:
SAMSHR1132_17700
MSSA476:
SAS1850
Mu3:
SAHV_1911
Mu50:
SAV1926
MW2:
MW1867
RF122:
SAB1862c
ST398:
SAPIG2029
T0131:
SAT0131_02056
TCH60:
HMPREF0772_11215
TW20:
SATW20_19200
USA300_TCH1516:
USA300HOU_1929
VC40:
SAVC_08890
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDAFDNVSINLDSTELRIK
N315 MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDAFDNVSINLDSTELRIK
NCTC8325 MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDAFDNVSINLDSTELRIK
Newman MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDAFDNVSINLDSTELRIK
USA300_FPR3757 MKKFFFIGLLVFVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDAFDNVSINLDSTELRIK
************************************************************
COL RGNQFRVKYDGDNDILINIVDKTLKISDKRSKTRGYAIDMNPFHENKKTLTIEMPDKMIK
N315 RGNQFRVKYDGDNDILINIVDKTLKISDKRSKTRGYAIDMNPFHENKKTLTIEMPDKMIK
NCTC8325 RGNQFRVKYDGDNDILINIVDKTLKISDKRSKTRGYAIDMNPFHENKKTLTIEMPDKMIK
Newman RGNQFRVKYDGDNDILINIVDKTLKISDKRSKTRGYAIDMNPFHENKKTLTIEMPDKMIK
USA300_FPR3757 RGNQFRVKYDGDNDILINIVDKTLKISDKRSKTRGYAIDMNPFHENKKTLTIEMPDKMIK
************************************************************
COL RLNLSSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDALDSKTNNSSTYISKSNIKNSN
N315 RLNLSSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDALDSKTNNSSTYISKSNIKNSN
NCTC8325 RLNLSSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDALDSKTNNSSTYISKSNIKNSN
Newman RLNLSSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDALDSKTNNSSTYISKSNIKNSN
USA300_FPR3757 RLNLSSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDALDSKTNNSSTYISKSNIKNSN
************************************************************
COL IKVVIGTLQIDKSQIKQSIFLNDHGDIEFKNMPSKVDAKASTKQGDIRFKYDSKPEDTIL
N315 IKVVIGTLQIDKSQIKQSIFLNDHGDIEFKNMPSKVDAKASTKQGDIRFKYDSKPEDTIL
NCTC8325 IKVVIGTLQIDKSQIKQSIFLNDHGDIEFKNMPSKVDAKASTKQGDIRFKYDSKPEDTIL
Newman IKVVIGTLQIDKSQIKQSIFLNDHGDIEFKNMPSKVDAKASTKQGDIRFKYDSKPEDTIL
USA300_FPR3757 IKVVIGTLQIDKSQIKQSIFLNDHGDIEFKNMPSKVDAKASTKQGDIRFKYDSKPEDTIL
************************************************************
COL KLNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTIDGNIKVE
N315 KLNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTIDGNIKVE
NCTC8325 KLNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTIDGNIKVE
Newman KLNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTIDGNIKVE
USA300_FPR3757 KLNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTIDGNIKVE
****************************************