Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004993000
- symbol?: —
- synonym:
- description?: DUF1700 domain-containing protein
- DUF1700 domain-containing protein
- hypothetical protein with DUF1700
- membrane protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5176291..5176773
- synteny block?: BlockID0038740
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1885
08BA02176:
C248_2014
11819-97:
MS7_1962
6850:
RSAU_001822
71193:
ST398NM01_2048
ECT-R 2:
ECTR2_1799
ED133:
SAOV_2029
ED98:
SAAV_1994
HO 5096 0412:
SAEMRSA15_18430
JH1:
SaurJH1_2017
JH9:
SaurJH9_1984
JKD6008:
SAA6008_01948
JKD6159:
SAA6159_01858
LGA251:
SARLGA251_18110
M013:
M013TW_1964
MRSA252:
SAR2019
MSHR1132:
SAMSHR1132_17710
MSSA476:
SAS1851
Mu3:
SAHV_1912
Mu50:
SAV1927
MW2:
MW1868
RF122:
SAB1863c
ST398:
SAPIG2048
T0131:
SAT0131_02057
TCH60:
HMPREF0772_11214
TW20:
SATW20_19210
USA300_TCH1516:
USA300HOU_1930
VC40:
SAVC_08895
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNKITYLNELETALDALPRHLRDQKMYEYERYFYEQELNGVDEGEILKKLKDPQDVAAET
N315 MNKITYLNELETALDALPRHLRDQKMYEYERYFYEQELNGVDEGEILKKLKDPQDVAAET
NCTC8325 -------------------------MYEYERYFYEQELNGVDEGEILKKLKDPQDVAAET
Newman MNKITYLNELETALDALPRHLRDQKMYEYERYFYEQELNGVDEGEILKKLKDPQDVAAET
USA300_FPR3757 MNKITYLNELETALDALPRHLRDQKMYEYERYFYEQELNGVDEGEILKKLKDPQDVAAET
***********************************
COL KARSVIDYAESKPTFENISRAVAASLSLGILSIFVILIPVSIVGLFVLALFLISLLLLFC
N315 KARSVIDYAESKPTFENISRAVAASLSLGILSIFVILIPVSIVGLFVLALFLISLLLLFC
NCTC8325 KARSVIDYAESKPTFENISRAVAASLSLGILSIFVILIPVSIVGLFVLALFLISLLLLFC
Newman KARSVIDYAESKPTFENISRAVAASLSLGILSIFVILIPVSIVGLFVLALFLISLLLLFC
USA300_FPR3757 KARSVIDYAESKPTFENISRAVAASLSLGILSIFVILIPVSIVGLFVLALFLISLLLLFC
************************************************************
COL PIILLASAISRGIVDSISNVFFAISYSGLGLVFIIVIFKILEYIYRLILKYLLWYIKTVK
N315 PIILLASAISRGIVDSISNVFFAISYSGLGLVFIIVIFKILEYIYRLILKYLLWYIKTVK
NCTC8325 PIILLASAISRGIVDSISNVFFAISYSGLGLVFIIVIFKILEYIYRLILKYLLWYIKTVK
Newman PIILLASAISRGIVDSISNVFFAISYSGLGLVFIIVIFKILEYIYRLILKYLLWYIKTVK
USA300_FPR3757 PIILLASAISRGIVDSISNVFFAISYSGLGLVFIIVIFKILEYIYRLILKYLLWYIKTVK
************************************************************
COL GSVRK
N315 GSVRK
NCTC8325 GSVRK
Newman GSVRK
USA300_FPR3757 GSVRK
*****