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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

Summary[edit | edit source]

  • pan ID?: SAUPAN005038000
  • symbol?: sep
  • synonym:
  • description?: staphylococcal enterotoxin P

      descriptions from strain specific annotations:

    • staphylococcal enterotoxin P
    • exotoxin
    • enterotoxin P
    • enterotoxin type A precursor
    • Enterotoxin P, phage associated
    • enterotoxin A precursor
    • Enterotoxin type A
    • staphylococcal/Streptococcal toxin, beta-grasp domain protein
  • strand?: -
  • coordinates?: 5203246..5203974
  • synteny block?: BlockID0039160
  • occurrence?: in 36% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    SA1761 (sep)
    NCTC8325:
    Newman:
    NWMN_1883 (sea)
    USA300_FPR3757:
    04-02981:
    SA2981_1909 (sep)
    08BA02176:
    11819-97:
    6850:
    71193:
    ECT-R 2:
    ECTR2_1821
    ED133:
    ED98:
    HO 5096 0412:
    JH1:
    JH9:
    JKD6008:
    SAA6008_02002 (sep)
    JKD6159:
    LGA251:
    M013:
    MRSA252:
    SAR2043
    MSHR1132:
    MSSA476:
    SAS1872
    Mu3:
    SAHV_1934 (sep)
    Mu50:
    SAV1948 (sep)
    MW2:
    MW1889 (sea)
    RF122:
    ST398:
    T0131:
    SAT0131_02081
    TCH60:
    TW20:
    SATW20_19410 (sea)
    USA300_TCH1516:
    VC40:

Genome Viewer[edit | edit source]

N315
Newman

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    N315            MSKIKKTTFILLSFIALTLITSPFVNCSEKSEEINGKDLQKKSELQGTALSNLRQTYYHN
    Newman          ---MKKTAFILLLFIALTWTTSPLVNGSEKSEEINEKDLRKKSELQGAALGNLKQIYYYN
                       :***:**** *****  ***:** ******** ***:*******:**.**:* **:*

    N315            GSAIIENKESNDQFLKNTILFNDFFTGHQWYNDLLVDLGSKDTANIYKGKKVDLYGVYYG
    Newman          EKAKTENKESHDQFLQHTILFKGFFTNHSWYNDLLVDFDSKDIVDKYKGKKVDLYGAYYG
                     .*  *****:****::****:.***.*.********:.*** .: **********.***

    N315            YQCTGGTPFKTACMYGGVTLHDNNQLEEEKKVPINLWIDGKQNTVPLGTVKTNKKEVTVQ
    Newman          YQCAGGTPNKTACMYGGVTLHDNNRLTEEKKVPINLWLDGKQNTVPLETVKTNKKNVTVQ
                    ***:**** ***************:* **********:********* *******:****

    N315            ELDLQSRHYLHETYNLYNTDAFNGKIQRGLIEFHPSSGDSVGYDLFGAQGQYPDTQLRIY
    Newman          ELDLQARRYLQEKYNLYNSDVFDGKVQRGLIVFHTSTEPSVNYDLFGAQGQNSNTLLRIY
                    *****:*:**:*.*****:*.*:**:***** **.*:  **.********* .:* ****

    N315            RDNKTIKSKNMHIDIYLYTT
    Newman          RDNKTINSENMHIDIYLYTS
                    ******:*:**********: