PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005119000
• symbol^?: —
• synonym:
• description^?: oxidoreductase

  descriptions from strain specific annotations:

  • oxidoreductase
  • anti repressor
  • phage anti repressor
  • phi77 ORF014-like protein, phage anti-repressor protein
  • phage antirepressor protein
  • bacteriophage antirepressor
  • phage antirepressor family protein
  • pseudogene
  • putative anti repressor
• strand^?: -
• coordinates^?: 5260544..5262389
• synteny block^?: BlockID0039720
• occurrence^?: in 58% of 33 strains

⊟Orthologs

COL:
—
N315:
SA1801
NCTC8325:
—
Newman:
NWMN_1918
USA300_FPR3757:
SAUSA300_1966
04-02981:
SA2981_1955
08BA02176:
—
11819-97:
—
6850:
—
71193:
ST398NM01_2954
ECT-R 2:
ECTR2_1865
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_19160
JH1:
SaurJH1_2087
JH9:
SaurJH9_2050
JKD6008:
SAA6008_02047
JKD6159:
SAA6159_01928
LGA251:
—
M013:
—
MRSA252:
SAR2096
MSHR1132:
—
MSSA476:
SAS1914
Mu3:
SAHV_1980
Mu50:
SAV1994
MW2:
MW1932
RF122:
—
ST398:
—
T0131:
SAT0131_02128
TCH60:
—
TW20:
SATW20_19910
USA300_TCH1516:
USA300HOU_2000
VC40:
—

⊟Genome Viewer

N315
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  N315            MQALQTKSNIGEMFNIQEKENGEIAISGRELHQALEVKTPYKKWFERMSDYGFEENIDYI
  Newman          MQALQTKSNIGEMFNIQEKENGEIAISGRELHQALEVKTPYKKWFERMSDYGFEENIDYI
  USA300_FPR3757  MQALQTNSNIGEMFNIQEKENGEIAISGRELHQALEVKTAYKDWFPRMLKYGFEENTDYT
                  ******:********************************.**.** ** .****** ** 
  
  N315            VTDIFVHNPLGGRQNQTDHALTLDTAKEIAMIQRSEPGKRARQYFIQVEKAWNSPEMIMQ
  Newman          VTDIFVHNPLGGRQNQTDHALTLDTAKEIAMIQRSEPGKRARQYFIQVEKAWNSPEMIMQ
  USA300_FPR3757  AIAQKRATAQGNMTHYIDHALTLDTAKEIAMIQRSEPGKRARQYFIQVEKAWNSPEMIMQ
                  .      .. *.  :  *******************************************
  
  N315            RALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVGELAKIIKQNGINIGQRRLFE
  Newman          RALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVGELAKIIKQNGINIGQRRLFE
  USA300_FPR3757  RALKIANNTINQLETKIERDKPKIVFADAVATTKTSILVGELAKIIKQNGVNIGQRRLFE
                  **************************************************:*********
  
  N315            WLRQNGFLIKRKGVDYNMPTQYSMERELFEIKETSITHSDGHTSISKTPKVTGKGQQYFV
  Newman          WLRQNGFLIKRKGVDYNMPTQYSMERELFEIKETSITHSDGHTSISKTPKVTGKGQQYFV
  USA300_FPR3757  WLRQNGFLIKRKGVDYNMPTQYSMERELFEIKETSITHSDGHTSISKTPKVTGKGQQYFV
                  ************************************************************
  
  N315            NKFLGEKQTS
  Newman          NKFLGEKQTS
  USA300_FPR3757  NKFLGEKQTS
                  **********