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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159JSNZLGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005160000
- symbol?: —
- synonym:
- description?: phi77 ORF017-like protein
- phi77 ORF017-like protein
- toxin MazF
- phage protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5322360..5330970
- synteny block?: BlockID0040060
- occurrence?: in 18% of 34 strains
sma (sma3) : prophage single-protein MazF-like antiviral defense system [1]
The single-protein MazF-like antiviral defense is a recently-described ribonuclease-based system that restricts replication of non-self prophage. While questions remain regarding exact mechanisms and potential for self-immunity, this system is thought to reduce superinfection by invading non-self phages.
⊟Orthologs[edit | edit source]
COL:
—
N315:
—
NCTC8325:
—
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_19250
JH1:
SaurJH1_2096
JH9:
SaurJH9_2059
JKD6008:
—
JKD6159:
—
JSNZ:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
SAMSHR1132_18440
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_2008
VC40:
—
⊟Genome Viewer[edit | edit source]
⊟Alignments[edit | edit source]
- alignment of orthologues:
- ↑ Ines Bleriot, Lucia Blasco, Olga Pacios, Laura Fernández-García, Antón Ambroa, María López, Concha Ortiz-Cartagena, Felipe Fernández Cuenca, Jesús Oteo-Iglesias, Álvaro Pascual, Luis Martínez-Martínez, Pilar Domingo-Calap, Thomas K Wood, María Tomás
The role of PemIK (PemK/PemI) type II TA system from Klebsiella pneumoniae clinical strains in lytic phage infection.
Sci Rep: 2022, 12(1);4488
[PubMed:35296704] [WorldCat.org] [DOI] (I e)Alfred Fillol-Salom, Jakob T Rostøl, Adaeze D Ojiogu, John Chen, Gill Douce, Suzanne Humphrey, José R Penadés
Bacteriophages benefit from mobilizing pathogenicity islands encoding immune systems against competitors.
Cell: 2022, 185(17);3248-3262.e20
[PubMed:35985290] [WorldCat.org] [DOI] (I p)