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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159JSNZLGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

Summary[edit | edit source]

  • pan ID?: SAUPAN005160000
  • symbol?:
  • synonym:
  • description?: phi77 ORF017-like protein

      descriptions from strain specific annotations:

    • phi77 ORF017-like protein
    • toxin MazF
    • phage protein
  • strand?: +
  • coordinates?: 5322360..5330970
  • synteny block?: BlockID0040060
  • occurrence?: in 18% of 34 strains

sma (sma3) : prophage single-protein MazF-like antiviral defense system [1]

The single-protein MazF-like antiviral defense is a recently-described ribonuclease-based system that restricts replication of non-self prophage. While questions remain regarding exact mechanisms and potential for self-immunity, this system is thought to reduce superinfection by invading non-self phages.

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    08BA02176:
    11819-97:
    6850:
    71193:
    ECT-R 2:
    ED133:
    ED98:
    HO 5096 0412:
    SAEMRSA15_19250
    JH1:
    SaurJH1_2096
    JH9:
    SaurJH9_2059
    JKD6008:
    JKD6159:
    JSNZ:
    LGA251:
    M013:
    MRSA252:
    MSHR1132:
    SAMSHR1132_18440
    MSSA476:
    Mu3:
    Mu50:
    MW2:
    RF122:
    ST398:
    T0131:
    TCH60:
    TW20:
    USA300_TCH1516:
    USA300HOU_2008
    VC40:

Genome Viewer[edit | edit source]

Alignments[edit | edit source]

  • alignment of orthologues:

  1. Ines Bleriot, Lucia Blasco, Olga Pacios, Laura Fernández-García, Antón Ambroa, María López, Concha Ortiz-Cartagena, Felipe Fernández Cuenca, Jesús Oteo-Iglesias, Álvaro Pascual, Luis Martínez-Martínez, Pilar Domingo-Calap, Thomas K Wood, María Tomás
    The role of PemIK (PemK/PemI) type II TA system from Klebsiella pneumoniae clinical strains in lytic phage infection.
    Sci Rep: 2022, 12(1);4488
    [PubMed:35296704] [WorldCat.org] [DOI] (I e)
    Alfred Fillol-Salom, Jakob T Rostøl, Adaeze D Ojiogu, John Chen, Gill Douce, Suzanne Humphrey, José R Penadés
    Bacteriophages benefit from mobilizing pathogenicity islands encoding immune systems against competitors.
    Cell: 2022, 185(17);3248-3262.e20
    [PubMed:35985290] [WorldCat.org] [DOI] (I p)