PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005219000
• symbol^?: —
• synonym:
• description^?: mobile element-associated protein
• strand^?: -
• coordinates^?: 5380264..5380605
• synteny block^?: BlockID0040430
• occurrence^?: in 36% of 33 strains

⊟Orthologs

COL:
—
N315:
SA1821
NCTC8325:
SAOUHSC_02251
Newman:
—
USA300_FPR3757:
—
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_19360
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS1933
Mu3:
SAHV_1999
Mu50:
SAV2013
MW2:
MW1950
RF122:
SAB1895c
ST398:
—
T0131:
SAT0131_02152
TCH60:
—
TW20:
SATW20_20110
USA300_TCH1516:
USA300HOU_2022
VC40:
SAVC_09010

⊟Genome Viewer

N315
NCTC8325

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  N315            MDKKQIKDFVCDYHKRTISDVLIDDEINTDEFFSIGDENSNEWMADDNIDDHIVKNHLEM
  NCTC8325        -------------------------------------------MTDDNVNDHIIKNHIEM
                                                             *:***::***:***:**
  
  N315            IVDQVANDKEFYIFDSLIQGRSFKDISNVLECSEQSVRLWYETLLDKIVEVIE
  NCTC8325        IVDRLATDKEFYIFDSLIQGLSYQDISSALDCSEQSVILWYETILDKIVGVIK
                  ***::*.************* *::***..*:****** *****:***** **: