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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005386000
- symbol?: ywpF
- synonym:
- description?: YwpF-like protein
- YwpF-like protein
- ywpF protein
- YwpF family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5551723..5552227
- synteny block?: BlockID0041820
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2038
08BA02176:
C248_2112
11819-97:
MS7_2114 (ywpF)
6850:
RSAU_001936
71193:
ST398NM01_2140
ECT-R 2:
ECTR2_1954
ED133:
SAOV_2139
ED98:
SAAV_2153 (ywpF)
HO 5096 0412:
SAEMRSA15_20060
JH1:
SaurJH1_2172
JH9:
SaurJH9_2134
JKD6008:
SAA6008_02136 (ywpF)
JKD6159:
SAA6159_02011 (ywpF)
LGA251:
SARLGA251_18990
M013:
M013TW_2057
MRSA252:
SAR2186
MSHR1132:
SAMSHR1132_19210
MSSA476:
SAS2001
Mu3:
SAHV_2082
Mu50:
SAV2097
MW2:
MW2022
RF122:
SAB1982
ST398:
SAPIG2140
T0131:
SAT0131_02258
TCH60:
HMPREF0772_11094 (ywpF)
TW20:
SATW20_22360
USA300_TCH1516:
USA300HOU_2088
VC40:
SAVC_09365
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ---------------------MKTFKAVRFQIVNEHGRIIEYELEDGVIINKEESGTGWL
N315 ---------------------MKTFKAVRFQIVNEHGRIIEYELEDGVIINKEESGTGWL
NCTC8325 MTLNLLNNSKIINIKLMGCGNMKTFKAVRFQIVNEHGRIIEYELEDGVIINKEESGTGWL
Newman MTLNLLNNSKIINIKLMGCGNMKTFKAVRFQIVNEHGRIIEYELEDGVIINKEESGTGWL
USA300_FPR3757 ---------------------MKTFKAVRFQIVNEHGRIIEYELEDGVIINKEESGTGWL
***************************************
COL LEIVISNEHYETFKEYQDNEQLLDIRVVITRPANDPALFESTVKSIKNFKTTMSIVFECH
N315 LEIVISNEHYETFKEYQDNEQLLDIRVVITRPANDPALFESTVKSIKNFKTTMSIVFECH
NCTC8325 LEIVISNEHYETFKEYQDNEQLLDIRVVITRPANDPALFESTVKSIKNFKTTMSIVFECH
Newman LEIVISNEHYETFKEYQDNEQLLDIRVVITRPANDPALFESTVKSIKNFKTTMSIVFECH
USA300_FPR3757 LEIVISNEHYETFKEYQDNEQLLDIRVVITRPANDPALFESTVKSIKNFKTTMSIVFECH
************************************************************
COL IYTLRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE
N315 IYTLRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE
NCTC8325 IYTLRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE
Newman IYTLRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE
USA300_FPR3757 IYTLRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE
***********************************************