Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005440000
- symbol?: manA
- synonym:
- description?: mannose-6-phosphate isomerase
- mannose-6-phosphate isomerase
- mannose-6-phosphate isomerase, class I
- class I mannose-6-phosphate isomerase
- mannose-6 phosphate isomerase pmi
- pseudogene
- putative mannose-6-phosphate isomerase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5598933..5600024
- synteny block?: BlockID0042350
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2083
08BA02176:
C248_2158
11819-97:
MS7_2161
6850:
RSAU_001980 (manA1)
71193:
ST398NM01_2185
ECT-R 2:
ECTR2_1999 (manA)
ED133:
SAOV_2182c
ED98:
SAAV_2198 (manA1)
HO 5096 0412:
SAEMRSA15_20510
JH1:
SaurJH1_2217
JH9:
SaurJH9_2179
JKD6008:
SAA6008_02182 (manA1)
JKD6159:
SAA6159_02057 (manA1)
LGA251:
SARLGA251_19440
M013:
M013TW_2103
MRSA252:
SAR2231
MSHR1132:
SAMSHR1132_19660
MSSA476:
SAS2046
Mu3:
SAHV_2127
Mu50:
SAV2143
MW2:
MW2067
RF122:
SAB2027c
ST398:
SAPIG2185 (manA)
T0131:
SAT0131_02308
TCH60:
HMPREF0772_11047 (pmi2)
TW20:
SATW20_22810
USA300_TCH1516:
USA300HOU_2132 (manA1)
VC40:
SAVC_09590
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRI
N315 MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRI
NCTC8325 M----------------------IQL-----GECWCVSAHPNGTSEIINGPYQGQTLDRI
Newman MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRI
USA300_FPR3757 MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRI
* ** *****************************
COL WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE
N315 WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE
NCTC8325 WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE
Newman WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE
USA300_FPR3757 WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE
************************************************************
COL EDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET
N315 EDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET
NCTC8325 EDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET
Newman EDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET
USA300_FPR3757 EDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET
************************************************************
COL MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS
N315 MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS
NCTC8325 MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS
Newman MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS
USA300_FPR3757 MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS
************************************************************
COL NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSV
N315 NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSV
NCTC8325 NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSV
Newman NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSV
USA300_FPR3757 NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSV
************************************************************
COL FEGDFTLMISYV
N315 FEGDFTLMISYV
NCTC8325 FEGDFTLMISYV
Newman FEGDFTLMISYV
USA300_FPR3757 FEGDFTLMISYV
************