PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005567000
• symbol^?: htsA
• synonym:
• description^?: ABC transporter substrate-binding protein

  descriptions from strain specific annotations:

  • ABC transporter substrate-binding protein
  • iron compound ABC transporter iron compound-binding protein
  • ferrichrome ABC transporter lipoprotein
  • heme ABC transporter lipoprotein
  • periplasmic binding protein
  • ABC transporter periplasmic binding protein
  • ferrichrome-binding protein
  • Heme ABC type transporter HtsABC, heme-binding protein
  • heme transport system lipoprotein
  • iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein
  • iron (Fe3+) ABC transporter binding protein
  • iron(III) dicitrate-binding protein
  • iron compound ABC transporter, iron compound-binding protein
  • iron-dicitrate transporter substrate-binding subunit, FecB
  • putative transport system binding lipoprotein
• strand^?: -
• coordinates^?: 5708253..5709236
• synteny block^?: BlockID0043270
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2167
N315:
SA1979
NCTC8325:
SAOUHSC_02430
Newman:
NWMN_2078
USA300_FPR3757:
SAUSA300_2136
04-02981:
SA2981_2115 (htsA)
08BA02176:
C248_2214
11819-97:
MS7_2200
6850:
RSAU_002021 (htsA)
71193:
ST398NM01_2237
ECT-R 2:
ECTR2_2038
ED133:
SAOV_2224c
ED98:
SAAV_2238
HO 5096 0412:
SAEMRSA15_20820
JH1:
SaurJH1_2246
JH9:
SaurJH9_2208
JKD6008:
SAA6008_02215 (fecB)
JKD6159:
SAA6159_02088 (fecB)
LGA251:
SARLGA251_19720
M013:
M013TW_2143
MRSA252:
SAR2268
MSHR1132:
SAMSHR1132_20090
MSSA476:
SAS2078
Mu3:
SAHV_2161
Mu50:
SAV2177 (htsA)
MW2:
MW2103
RF122:
SAB2058c
ST398:
SAPIG2237
T0131:
SAT0131_02346
TCH60:
HMPREF0772_11015
TW20:
SATW20_23120
USA300_TCH1516:
USA300HOU_2169
VC40:
SAVC_09755

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MRGLKTFSILGLIVALLLVAACGNTDNSSKKESSTKDTISVKDENGTVKVPKDAKRIVVL
  N315            MRGLKTFSILGLIVALLLVAACGNTDNSSKKESSTKDTISVKDENGTVKVPKDAKRIVVL
  NCTC8325        MRGLKTFSILGLIVALLLVAACGNTDNSSKKESSTKDTISVKDENGTVKVPKDAKRIVVL
  Newman          MRGLKTFSILGLIVALLLVAACGNTDNSSKKESSTKDTISVKDENGTVKVPKDAKRIVVL
  USA300_FPR3757  MRGLKTFSILGLIVALLLVAACGNTDNSSKKESSTKDTISVKDENGTVKVPKDAKRIVVL
                  ************************************************************
  
  COL             EYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLI
  N315            EYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLI
  NCTC8325        EYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLI
  Newman          EYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLI
  USA300_FPR3757  EYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLI
                  ************************************************************
  
  COL             IADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKL
  N315            IADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKL
  NCTC8325        IADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKL
  Newman          IADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKL
  USA300_FPR3757  IADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKL
                  ************************************************************
  
  COL             INKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYL
  N315            INKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYL
  NCTC8325        INKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYL
  Newman          INKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYL
  USA300_FPR3757  INKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYL
                  ************************************************************
  
  COL             KGPYLQLDTEHLADLNPERMIIMTDHAKKDSAEFKKLQEDATWKKLNAVKNNRVDIVDRD
  N315            KGPYLQLDTEHLADLNPERMIIMTDHAKKDSAEFKKLQEDATWKKLNAVKNNRVDIVDRD
  NCTC8325        KGPYLQLDTEHLADLNPERMIIMTDHAKKDSAEFKKLQEDATWKKLNAVKNNRVDIVDRD
  Newman          KGPYLQLDTEHLADLNPERMIIMTDHAKKDSAEFKKLQEDATWKKLNAVKNNRVDIVDRD
  USA300_FPR3757  KGPYLQLDTEHLADLNPERMIIMTDHAKKDSAEFKKLQEDATWKKLNAVKNNRVDIVDRD
                  ************************************************************
  
  COL             VWARSRGLISSEEMAKELVELSKKEQK
  N315            VWARSRGLISSEEMAKELVELSKKEQK
  NCTC8325        VWARSRGLISSEEMAKELVELSKKEQK
  Newman          VWARSRGLISSEEMAKELVELSKKEQK
  USA300_FPR3757  VWARSRGLISSEEMAKELVELSKKEQK
                  ***************************