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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005578000
- symbol?: asp23
- synonym:
- description?: alkaline shock protein 23
- alkaline shock protein 23
- Asp23/Gls24 family envelope stress response protein
- alkaline shock protein Asp23
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5718232..5718741
- synteny block?: BlockID0043380
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2120 (asp23)
08BA02176:
C248_2220 (asp23)
11819-97:
MS7_2205 (asp23)
6850:
RSAU_002026 (asp23)
71193:
ST398NM01_2242
ECT-R 2:
ECTR2_2043
ED133:
SAOV_2229c
ED98:
SAAV_2243
HO 5096 0412:
SAEMRSA15_20870 (asp23)
JH1:
SaurJH1_2252
JH9:
SaurJH9_2213
JKD6008:
SAA6008_02223
JKD6159:
SAA6159_02093
LGA251:
SARLGA251_19770 (asp23)
M013:
M013TW_2148
MRSA252:
SAR2273 (asp23)
MSHR1132:
SAMSHR1132_20140
MSSA476:
SAS2083
Mu3:
SAHV_2166 (asp23)
Mu50:
SAV2182 (asp23)
MW2:
MW2108 (asp23)
RF122:
SAB2063c (asp23)
ST398:
SAPIG2242
T0131:
SAT0131_02355 (memB)
TCH60:
HMPREF0772_11009 (asp)
TW20:
SATW20_23200 (asp23)
USA300_TCH1516:
USA300HOU_2175 (asp23)
VC40:
SAVC_09800
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTVDNNKAKQAYDNQTGVNEKEREERQKQQEQNQEPQFKNKLTFSDEVVEKIAGIAAREV
N315 MTVDNNKAKQAYDNQTGVNEKEREERQKQQEQNQEPQFKNKLTFSDEVVEKIAGIAAREV
NCTC8325 MTVDNNKAKQAYDNQTGVNEKEREERQKQQEQNQEPQFKNKLTFSDEVVEKIAGIAAREV
Newman MTVDNNKAKQAYDNQTGVNEKEREERQKQQEQNQEPQFKNKLTFSDEVVEKIAGIAAREV
USA300_FPR3757 MTVDNNKAKQAYDNQTGVNEKEREERQKQQEQNQEPQFKNKLTFSDEVVEKIAGIAAREV
************************************************************
COL KGILDMKGGLTDTFTNAFSSGNNVTQGVSVEVGEKQAAVDLKVILEYGESAPKIFRKVTE
N315 KGILDMKGGLTDTFTNAFSSGNNVTQGVSVEVGEKQAAVDLKVILEYGESAPKIFRKVTE
NCTC8325 KGILDMKGGLTDTFTNAFSSGNNVTQGVSVEVGEKQAAVDLKVILEYGESAPKIFRKVTE
Newman KGILDMKGGLTDTFTNAFSSGNNVTQGVSVEVGEKQAAVDLKVILEYGESAPKIFRKVTE
USA300_FPR3757 KGILDMKGGLTDTFTNAFSSGNNVTQGVSVEVGEKQAAVDLKVILEYGESAPKIFRKVTE
************************************************************
COL LVKEQVKYITGLDVVEVNMQVDDVMTQKEWKQKHEKNNENNNQERQGLQ
N315 LVKEQVKYITGLDVVEVNMQVDDVMTQKEWKQKHEKNNENNNQERQGLQ
NCTC8325 LVKEQVKYITGLDVVEVNMQVDDVMTQKEWKQKHEKNNENNNQERQGLQ
Newman LVKEQVKYITGLDVVEVNMQVDDVMTQKEWKQKHEKNNENNNQERQGLQ
USA300_FPR3757 LVKEQVKYITGLDVVEVNMQVDDVMTQKEWKQKHEKNNENNNQERQGLQ
*************************************************