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Summary[edit | edit source]

  • pan ID?: SAUPAN005579000
  • symbol?:
  • synonym:
  • description?: DUF2273 domain-containing protein

      descriptions from strain specific annotations:

    • DUF2273 domain-containing protein
    • small integral membrane protein, putative
    • small integral membrane protein
    • Small integral membrane protein-like protein
  • strand?: -
  • coordinates?: 5718806..5719068
  • synteny block?: BlockID0043390
  • occurrence?: in 100% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2121
    08BA02176:
    C248_2221
    11819-97:
    MS7_2206
    6850:
    RSAU_002027
    71193:
    ST398NM01_2243
    ECT-R 2:
    ECTR2_2044
    ED133:
    SAOV_2230c
    ED98:
    SAAV_2244
    HO 5096 0412:
    SAEMRSA15_20880
    JH1:
    SaurJH1_2253
    JH9:
    SaurJH9_2214
    JKD6008:
    SAA6008_02224
    JKD6159:
    SAA6159_02094
    LGA251:
    SARLGA251_19780
    M013:
    M013TW_2149
    MRSA252:
    SAR2274
    MSHR1132:
    SAMSHR1132_20150
    MSSA476:
    SAS2084
    Mu3:
    SAHV_2167
    Mu50:
    SAV2183
    MW2:
    MW2109
    RF122:
    SAB2064c
    ST398:
    SAPIG2243
    T0131:
    SAT0131_02356 (sspC)
    TCH60:
    HMPREF0772_11008
    TW20:
    SATW20_23210
    USA300_TCH1516:
    USA300HOU_2176
    VC40:
    SAVC_09805

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MANNHNQNGQDSTQQVINFLKVFKWRIVGFLAFLLIAILFLTLGFWKTVLIIVLCLIGVG
    N315            MANNHNQNGQDSTQQVINFLKVFKWRIVGFLAFLLIAILFLTLGFWKTVLIIVLCLIGVG
    NCTC8325        MANNHNQNGQDSTQQVINFLKVFKWRIVGFLAFLLIAILFLTLGFWKTVLIIVLCLIGVG
    Newman          MANNHNQNGQDSTQQVINFLKVFKWRIVGFLAFLLIAILFLTLGFWKTVLIIVLCLIGVG
    USA300_FPR3757  MANNHNQNGQDSTQQVINFLKVFKWRIVGFLAFLLIAILFLTLGFWKTVLIIVLCLIGVG
                    ************************************************************

    COL             IGYMKDRKQDFMNFLNRWS
    N315            IGYMKDRKQDFMNFLNRWS
    NCTC8325        IGYMKDRKQDFMNFLNRWS
    Newman          IGYMKDRKQDFMNFLNRWS
    USA300_FPR3757  IGYMKDRKQDFMNFLNRWS
                    *******************