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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005714000
- symbol?: —
- synonym:
- description?: malonate transporter
- malonate transporter
- AEC family transporter
- membrane transport protein, putative
- AEC family malonate efflux carrier
- membrane protein
- membrane transport family protein
- Permease
- Transporter
- transporter, auxin efflux carrier (AEC) family
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5819091..5819981
- synteny block?: BlockID0044600
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2196
08BA02176:
C248_2295
11819-97:
MS7_2278
6850:
RSAU_002093
71193:
ST398NM01_2310
ECT-R 2:
ECTR2_2120
ED133:
SAOV_2296c
ED98:
SAAV_2320
HO 5096 0412:
SAEMRSA15_21560
JH1:
SaurJH1_2325
JH9:
SaurJH9_2284
JKD6008:
SAA6008_02295
JKD6159:
SAA6159_02164
LGA251:
SARLGA251_20430
M013:
M013TW_2216
MRSA252:
SAR2342
MSHR1132:
SAMSHR1132_20830
MSSA476:
SAS2148
Mu3:
SAHV_2242
Mu50:
SAV2258
MW2:
MW2176
RF122:
SAB2130c
ST398:
SAPIG2310
T0131:
SAT0131_02431
TCH60:
HMPREF0772_10941
TW20:
SATW20_23910
USA300_TCH1516:
USA300HOU_2240
VC40:
SAVC_10155
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTEQFTMIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSI
N315 MTEQFTMIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSI
NCTC8325 ------MIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSI
Newman MTEQFTMIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSI
USA300_FPR3757 ------MIILLIALGYFLKRINFIKATDSQVIATLVLNVTLPSLVIVNLNSAELKLSFSI
******************************************************
COL LPILMIIYGIVAKMIAVWFFRKYDNHMRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYF
N315 LPILMIIYGIVAKMIAVWFFRKYDNHMRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYF
NCTC8325 LPILMIIYGIVAKMIAVWFFRKYDNHMRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYF
Newman LPILMIIYGIVAKMIAVWFFRKYDNHMRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYF
USA300_FPR3757 LPILMIIYGIVAKMIAVWFFRKYDNHMRGSVGMMTGAMNIGLFAYPLIEVIWPKTGLIYF
************************************************************
COL VMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQSVPLVTYIVMFILNISHIHL
N315 GMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQSVPLVTYIVMFILNINHIHL
NCTC8325 VMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQSVPLVTYIVMFILNISHIHL
Newman VMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQSVPLVTYIVMFILNISHIHL
USA300_FPR3757 VMADIGGAFVMFGITYFVGSYFSEGSDQFDFKYLGKKLLQSVPLVTYIVMFILNISHIHL
******************************************************.****
COL PHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVYVL
N315 PHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVHVL
NCTC8325 PHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVYVL
Newman PHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVYVL
USA300_FPR3757 PHVAIDFFSILSHANMPLSMILLGVMLNFTLERKYIPATIKYLCLHYGLALVAGLLVYVL
*********************************************************:**
COL LPVSDDMIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAV
N315 LPVSDDMIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAV
NCTC8325 LPVSDDMIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAV
Newman LPVSDDMIKTTLLVTWMFPVGVAIISYGIQFKYRTLPFIGMTTNLTIIISIIILYVYQAV
USA300_FPR3757 LPVSDDMIKTTLLVTWMFPVGVAIISYGIQFKYRTLTFIGMTTNLTIIISIIILYVYQAV
************************************.***********************
COL FV
N315 FV
NCTC8325 FV
Newman FV
USA300_FPR3757 FV
**