Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005745000
- symbol?: —
- synonym:
- description?: purine nucleosidase
- purine nucleosidase
- inosine-uridine preferring nucleoside hydrolase
- inosine-uridine preferring nucleoside hydrolase family protein
- nucleoside hydrolase
- nucleoside hydrolase, putative
- putative inosine-uridine preferring nucleosidehydrolase
- inosine/uridine-preferring nucleoside hydrolase
- inosine-adenosine-guanosine-nucleoside hydrolase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5843060..5843929
- synteny block?: BlockID0044910
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2221
08BA02176:
C248_2321
11819-97:
MS7_2302
6850:
RSAU_002117
71193:
ST398NM01_2334
ECT-R 2:
ECTR2_2144
ED133:
SAOV_2322c
ED98:
SAAV_2346
HO 5096 0412:
SAEMRSA15_21810
JH1:
SaurJH1_2350
JH9:
SaurJH9_2308
JKD6008:
SAA6008_02320
JKD6159:
SAA6159_02188
LGA251:
SARLGA251_20670
M013:
M013TW_2241
MRSA252:
SAR2367
MSHR1132:
SAMSHR1132_21090
MSSA476:
SAS2173
Mu3:
SAHV_2267
Mu50:
SAV2283
MW2:
MW2201
RF122:
SAB2155c
ST398:
SAPIG2334
T0131:
SAT0131_02461 (isdF)
TCH60:
HMPREF0772_10915
TW20:
SATW20_24150
USA300_TCH1516:
USA300HOU_2265
VC40:
SAVC_10280
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTKKVYFNHDGGVDDLVSLFLLLQMENVQLIGVSTIGADCYLEPSLSASVKIINRFSNED
N315 MTKKVYFNHDGGVDDLVSLFLLLQMENVQLIGVSTIGADCYLEPSLSASVKIINRFSNED
NCTC8325 MTKKVYFNHDGGVDDLVSLFLLLQMENVQLIGVSTIGADCYLEPSLSASVKIINRFSNED
Newman MTKKVYFNHDGGVDDLVSLFLLLQMENVQLIGVSTIGADCYLEPSLSASVKIINRFSNED
USA300_FPR3757 MTKKVYFNHDGGVDDLVSLFLLLQMENVQLIGVSTIGADCYLEPSLSASVKIINRFSNED
************************************************************
COL IQVAPSYERGKNPFPKEWRMHAFFMDALPILNEPVKHVASNVSDKEAFEDIIQTLKRQSE
N315 IQVAPSYERGKNPFPKEWRMHAFFMDALPILNEPVKHVASNVSDKEAFEDIIQTLKRQSE
NCTC8325 IQVAPSYERGKNPFPKEWRMHAFFMDALPILNEPVKHVASNVSDKEAFEDIIQTLKRQSE
Newman IQVAPSYERGKNPFPKEWRMHAFFMDALPILNEPVKHVASNVSDKEAFEDIIQTLKRQSE
USA300_FPR3757 IQVAPSYERGKNPFPKEWRMHAFFMDALPILNEPVKHVASNVSDKEAFEDIIQTLKRQSE
************************************************************
COL KVTLLFTGPLTDLAKALQKDSSIVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDP
N315 KVTLLFTGPLTDLAKALQKDSSIVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDP
NCTC8325 KVTLLFTGPLTDLAKALQKDSSIVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDP
Newman KVTLLFTGPLTDLAKALQKDSSIVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDP
USA300_FPR3757 KVTLLFTGPLTDLAKALQKDSSIVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDP
************************************************************
COL EAVKIVFDSDIEIDMVALESTNQVPLTLDVRQRWANERQYTGIDFLGVSYAAVPPLTHFI
N315 EAVKIVFDSDIEIDMVALESTNQVPLTLDVRQRWANERQYTGIDFLGVSYAAVPPLTHFI
NCTC8325 EAVKIVFDSDIEIDMVALESTNQVPLTLDVRQRWANERQYTGIDFLGVSYAAVPPLTHFI
Newman EAVKIVFDSDIEIDMVALESTNQVPLTLDVRQRWANERQYTGIDFLGVSYAAVPPLTHFI
USA300_FPR3757 EAVKIVFDSDIEIDMVALESTNQVPLTLDVRQRWANERQYTGIDFLGVSYAAVPPLTHFI
************************************************************
COL TNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGPSQGKTFECKDGRKINVINHVDNNA
N315 TNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGPSQGKTFECKDGRKINVINHVDNNA
NCTC8325 TNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGPSQGKTFECKDGRKINVINHVDNNA
Newman TNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGPSQGKTFECKDGRKINVINHVDNNA
USA300_FPR3757 TNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGPSQGKTFECKDGRKINVINHVDNNA
************************************************************
COL FFDYITALAKKVN
N315 FFDYITALAKKVN
NCTC8325 FFDYITALAKKVN
Newman FFDYITALAKKVN
USA300_FPR3757 FFDYITALAKKVN
*************