Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005800000
- symbol?: —
- synonym:
- description?: haloacid dehalogenase
- haloacid dehalogenase
- HAD superfamily hydrolase
- haloacid dehalogenase-like hydrolase
- HAD family hydrolase
- HAD hydrolase family protein
- phosphoglycolate phosphatase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5886292..5886927
- synteny block?: BlockID0045450
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2259
08BA02176:
C248_2362
11819-97:
MS7_2337
6850:
RSAU_002156
71193:
ST398NM01_2371
ECT-R 2:
ECTR2_2179
ED133:
SAOV_2360c
ED98:
SAAV_2382
HO 5096 0412:
SAEMRSA15_22180
JH1:
SaurJH1_2387
JH9:
SaurJH9_2344
JKD6008:
SAA6008_02356
JKD6159:
SAA6159_02224
LGA251:
SARLGA251_21030
M013:
M013TW_2277
MRSA252:
SAR2404
MSHR1132:
SAMSHR1132_21450
MSSA476:
SAS2213
Mu3:
SAHV_2304
Mu50:
SAV2320
MW2:
MW2241
RF122:
SAB2197c
ST398:
SAPIG2371
T0131:
SAT0131_02502
TCH60:
HMPREF0772_10875
TW20:
SATW20_24520
USA300_TCH1516:
—
VC40:
SAVC_10465
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MYRAVIFDFDGTIIDTEQHLFNVINKHLEMHNADPISIDFYRSSIGGAATDLHDHLIKAI
N315 MYRAVIFDFDGTIIDTEQHLFNVINKHLEMHNADPISIDFYRSSIGGAATDLHDHLIKAI
NCTC8325 MYRAVIFDFDGTIIDTEQHLFNVINKHLEMHNADPISIDFYRSSIGGAATDLHDHLIKAI
Newman MYRAVIFDFDGTIIDTEQHLFNVINKHLEMHNADPISIDFYRSSIGGAATDLHDHLIKAI
USA300_FPR3757 MYRAVIFDFDGTIIDTEQHLFNVINKHLEMHNADPISIDFYRSSIGGAATDLHDHLIKAI
************************************************************
COL GSENKDKLYEEHHLTSTTLPMIDTIKSLMAFLKQRHIPMAIATSSVKAEIMPTFKALGLD
N315 GSENKDKLYEEHHLTSTTLPMIDTIKSLMAFLKQRHIPMAIATSSVKAEIMPTFKALGLD
NCTC8325 GSENKDKLYEEHHLTSTTLPMIDTIKSLMAFLKQRHIPMAIATSSVKAEIMPTFKALGLD
Newman GSENKDKLYEEHHLTSTTLPMIDTIKSLMAFLKQRHIPMAIATSSVKAEIMPTFKALGLD
USA300_FPR3757 GSENKDKLYEEHHLTSTTLPMIDTIKSLMAFLKQRHIPMAIATSSVKAEIMPTFKALGLD
************************************************************
COL DYIEVVVGREDVEQVKPDPELYLSAVQQLNYMPTQCLAIEDSVNGATAAIAAGLDVIVNT
N315 DYIEVVVGREDVEQVKPDPELYLSAVQQLNYMPTQCLAIEDSVNGATAAIAAGLDVIVNT
NCTC8325 DYIEVVVGREDVEQVKPDPELYLSAVQQLNYMPTQCLAIEDSVNGATAAIAAGLDVIVNT
Newman DYIEVVVGREDVEQVKPDPELYLSAVQQLNYMPTQCLAIEDSVNGATAAIAAGLDVIVNT
USA300_FPR3757 DYIEVVVGREDVEQVKPDPELYLSAVQQLNYMPTQCLAIEDSVNGATAAIAAGLDVIVNT
************************************************************
COL NKMTSAQDFSNVDYVAKDIDYDQIVARFFTK
N315 NKMTSAQDFSNVDYVAKDIDYDQIVARFFTK
NCTC8325 NKMTSAQDFSNVDYVAKDIDYDQIVARFFTK
Newman NKMTSAQDFSNVDYVAKDIDYDQIVARFFTK
USA300_FPR3757 NKMTSAQDFSNVDYVAKDIDYDQIVARFFTK
*******************************