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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005845000
- symbol?: fni
- synonym:
- description?: isopentenyl pyrophosphate isomerase
- isopentenyl pyrophosphate isomerase
- type 2 isopentenyl-diphosphate Delta-isomerase
- Isopentenyl-diphosphate delta-isomerase, FMN-dependent
- isopentenyl-diphosphate delta-isomerase
- isopentenyl-diphosphate delta-isomerase, type 2
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5922280..5923329
- synteny block?: BlockID0045900
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2285 (fni)
08BA02176:
C248_2389 (fni)
11819-97:
MS7_2364 (fni)
6850:
RSAU_002180 (fni)
71193:
ST398NM01_2398
ECT-R 2:
ECTR2_2206 (fni)
ED133:
SAOV_2389c
ED98:
SAAV_2410 (fni)
HO 5096 0412:
SAEMRSA15_22440 (fni)
JH1:
SaurJH1_2416
JH9:
SaurJH9_2370
JKD6008:
SAA6008_02383 (fni)
JKD6159:
SAA6159_02250 (fni)
LGA251:
SARLGA251_21280 (fni)
M013:
M013TW_2303
MRSA252:
SAR2431 (fni)
MSHR1132:
SAMSHR1132_21700
MSSA476:
SAS2237
Mu3:
SAHV_2330 (fni)
Mu50:
SAV2346 (fni)
MW2:
MW2267 (fni)
RF122:
SAB2225c (fni)
ST398:
SAPIG2398 (fni)
T0131:
SAT0131_02532
TCH60:
HMPREF0772_10848 (fni)
TW20:
SATW20_24770 (fni)
USA300_TCH1516:
USA300HOU_2327
VC40:
SAVC_10590
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSDFQREQRKNEHVEIAMAQSDAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYP
N315 MSDFQREQRKNEHVEIAMAQSDAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYP
NCTC8325 MSDFQREQRKNEHVEIAMAQSDAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYP
Newman MSDFQREQRKNEHVEIAMAQSDAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYP
USA300_FPR3757 MSDFQREQRKNEHVEIAMAQSDAMHSDFDKMRFVHHSIPSINVNDIDLTSQTPDLTMAYP
************************************************************
COL VYINAMTGGSEWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGM
N315 IYINAMTGGSEWTKNINEKLAVVARETRLAMAVGSTHAALRNPRMAETFTIARKMNPEGM
NCTC8325 VYINAMTGGSEWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGM
Newman VYINAMTGGSEWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGM
USA300_FPR3757 VYINAMTGGSEWTKNINEKLAVVARETGLAMAVGSTHAALRNPRMAETFTIARKMNPEGM
:************************** ********************************
COL IFSNVGADVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS
N315 IFSNVGADVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS
NCTC8325 IFSNVGADVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS
Newman IFSNVGADVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS
USA300_FPR3757 IFSNVGADVPVEKALEAVELLEAQALQIHVNSPQELVMPEGNREFVTWLDNIASIVSRVS
************************************************************
COL VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMDYLSSWGQS
N315 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMDYLSSWGQS
NCTC8325 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMDYLSSWGQS
Newman VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMDYLSSWGQS
USA300_FPR3757 VPVIIKEVGFGMSKELMHDLQQIGVKYVDVSGKGGTNFVDIENERRANKDMDYLSSWGQS
************************************************************
COL TVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTVA
N315 TVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTVA
NCTC8325 TVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTVA
Newman TVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTVA
USA300_FPR3757 TVESLLETTAYQSEISVFASGGLRTPLDAIKSLALGAKATGMSRPFLNQVENNGIAHTVA
************************************************************
COL YVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPEILSWIEQRNLNIHRG
N315 YVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPEIMSWIEQRSLNIHRG
NCTC8325 YVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPEILSWIEQRNLNIHRG
Newman YVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPEILSWIEQRNLNIHRG
USA300_FPR3757 YVESFIEHMKSIMTMLDAKNIDDLTQKQIVFSPEILSWIEQRNLNIHRG
***********************************:******.******