PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005868000
• symbol^?: hrtA
• synonym:
• description^?: ABC transporter ATP-binding protein

  descriptions from strain specific annotations:

  • ABC transporter ATP-binding protein
  • hemin ABC transporter ATP-binding protein
  • ABC transporter, ATPase component, putative
  • hemin import ATP-binding protein
  • ABC superfamily ATP binding cassette transporter, ABC protein
  • ABC transporter, ATP-binding protein
  • ATP-binding ABC transporter
  • cobQ/CobB/MinD/ParA nucleotide binding domain protein
  • Heme efflux system ATPase HrtA
  • macrolide export ATP-binding/permease protein macB . domain protein
  • Putative hemin import ATP-binding protein hrtA
• strand^?: -
• coordinates^?: 5940544..5941209
• synteny block^?: BlockID0046130
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2356
N315:
SA2149
NCTC8325:
SAOUHSC_02640
Newman:
NWMN_2261
USA300_FPR3757:
SAUSA300_2306
04-02981:
SA2981_2298 (hrtA)
08BA02176:
C248_2404
11819-97:
MS7_2377
6850:
RSAU_002194
71193:
ST398NM01_2412
ECT-R 2:
ECTR2_2219
ED133:
SAOV_2403c
ED98:
SAAV_2424
HO 5096 0412:
SAEMRSA15_22570
JH1:
SaurJH1_2429
JH9:
SaurJH9_2383
JKD6008:
SAA6008_02397
JKD6159:
SAA6159_02263
LGA251:
SARLGA251_21420
M013:
M013TW_2317
MRSA252:
SAR2445
MSHR1132:
SAMSHR1132_21840
MSSA476:
SAS2250
Mu3:
SAHV_2343
Mu50:
SAV2359
MW2:
MW2280
RF122:
SAB2238c
ST398:
SAPIG2412
T0131:
SAT0131_02547 (mraW)
TCH60:
HMPREF0772_10833
TW20:
SATW20_24910
USA300_TCH1516:
USA300HOU_2342 (htrB)
VC40:
SAVC_10665

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MALVVEDIVKNFGEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLLSQTS
  N315            MALVVKDIVKNFGEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLLSQTS
  NCTC8325        MALVVEDIVKNFGEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLLSQTS
  Newman          MALVVEDIVKNFGEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLLSQTS
  USA300_FPR3757  MALVVEDIVKNFGEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLLSQTS
                  *****:******************************************************
  
  COL             GTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQEAGMTKQQSST
  N315            GTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQEAGMTKQQSST
  NCTC8325        GTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQEAGMTKQQSST
  Newman          GTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQEAGMTKQQSST
  USA300_FPR3757  GTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQEAGMTKQQSST
                  ************************************************************
  
  COL             RAIQLLKNIGLEDRLNVYPHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKV
  N315            RAIQLLKNIGLEDRLNVYPHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKV
  NCTC8325        RAIQLLKNIGLEDRLNVYPHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKV
  Newman          RAIQLLKNIGLEDRLNVYPHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKV
  USA300_FPR3757  RAIQLLKNIGLEDRLNVYPHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKV
                  ************************************************************
  
  COL             VEMIRQQIKEQQMIGIMITHDRRLFEYADRVIELEDGKITD
  N315            VEMIRQQIKEQQMIGIMITHDRRLFEYADRVIELEDGKITD
  NCTC8325        VEMIRQQIKEQQMIGIMITHDRRLFEYADRVIELEDGKITD
  Newman          VEMIRQQIKEQQMIGIMITHDRRLFEYADRVIELEDGKITD
  USA300_FPR3757  VEMIRQQIKEQQMIGIMITHDRRLFEYADRVIELEDGKITD
                  *****************************************