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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005897000
- symbol?: scrA
- synonym:
- description?: PTS sucrose transporter subunit IIBC
- PTS sucrose transporter subunit IIBC
- PTS system, sucrose-specific IIBC component
- PTS system sucrose-specific transporter subunit IIBC
- PTS system, sucrose-specific IIBC components
- PTS system sucrose-specific IIBC component, putative
- PTS family beta-glucosides porter, IIABC component
- PTS family sucrose porter component IIBC
- PTS system, sucrose-specific IIBC components, putative
- PTS system, sucrose-specific IIB component / PTS system, sucrose-specific IIC component
- PTS system sucrose-specific IIBC component
- PTS system trehalose-specific EIIBC component
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5967081..5968331
- synteny block?: BlockID0046420
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2316 (scrA)
08BA02176:
C248_2425 (scrA)
11819-97:
MS7_2396
6850:
RSAU_002215 (scrA)
71193:
ST398NM01_2432
ECT-R 2:
ECTR2_2238 (treP)
ED133:
SAOV_2425c
ED98:
SAAV_2443
HO 5096 0412:
SAEMRSA15_22780 (scrA)
JH1:
SaurJH1_2449
JH9:
SaurJH9_2403
JKD6008:
SAA6008_02416
JKD6159:
SAA6159_02281
LGA251:
SARLGA251_21630 (scrA)
M013:
M013TW_2339
MRSA252:
SAR2466 (scrA)
MSHR1132:
SAMSHR1132_22060
MSSA476:
SAS2269
Mu3:
SAHV_2361 (scrA)
Mu50:
SAV2377 (scrA)
MW2:
MW2299 (scrA)
RF122:
SAB2257c (scrA)
ST398:
SAPIG2432
T0131:
SAT0131_02568
TCH60:
HMPREF0772_10811 (scrA)
TW20:
SATW20_25090 (scrA)
USA300_TCH1516:
USA300HOU_2362 (scrA)
VC40:
SAVC_10755
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNYKQSAEEILNAIGGEENLDAMAHCATRLRLVLNDESLVNEEALNNMDVVKGTFSTGGQ
N315 MNYKQSAEDILNAIGGEENLDAMAHCATRLRLVLNDESLVNEEALNNMDVVKGTFSTGGQ
NCTC8325 MNYKQSAEEILNAIGGEENLDAMAHCATRLRLVLNDESLVNEEALNNMDVVKGTFSTGGQ
Newman MNYKQSAEEILNAIGGEENLDAMAHCATRLRLVLNDESLVNEEALNNMDVVKGTFSTGGQ
USA300_FPR3757 MNYKQSAEEILNAIGGEENLDAMAHCATRLRLVLNDESLVNEEALNNMDVVKGTFSTGGQ
********:***************************************************
COL YQIIIGSGTVNKVFSELEKLTGKEASTTSEVKAQSAKNMNPLQRFVKMLSDIFVPIIPAI
N315 YQIIIGSGTVNKVFSELEKLTGKEASTTSEVKAQSAKNMNPLQRFVKMLSDIFVPIIPAI
NCTC8325 YQIIIGSGTVNKVFSELEKLTGKEASTTSEVKAQSAKNMNPLQRFVKMLSDIFVPIIPAI
Newman YQIIIGSGTVNKVFSELEKLTGKEASTTSEVKAQSAKNMNPLQRFVKMLSDIFVPIIPAI
USA300_FPR3757 YQIIIGSGTVNKVFSELEKLTGKEASTTSEVKAQSAKNMNPLQRFVKMLSDIFVPIIPAI
************************************************************
COL VAGGLLMGLNNILTAKDLFFSGKSLIDVYSQFAGLAEMINVFANAPFTLLPILIGFSAAK
N315 VAGGLLMGLNNILTAKDLFFSGKSLIDVYSQFAGLAEMINVFANAPFTLLPILIGFSAAK
NCTC8325 VAGGLLMGLNNILTAKDLFFSGKSLIDVYSQFAGLAEMINVFANAPFTLLPILIGFSAAK
Newman VAGGLLMGLNNILTAKDLFFSGKSLIDVYSQFAGLAEMINVFANAPFTLLPILIGFSAAK
USA300_FPR3757 VAGGLLMGLNNILTAKDLFFSGKSLIDVYSQFAGLAEMINVFANAPFTLLPILIGFSAAK
************************************************************
COL RFGGNPFLGAALGMILVHPSLMSAYDFPKAVEAGKAIPYWDVFGLHINQVGYQGQVLPML
N315 RFGGNPFLGAVLGMILVHPSLMSAYDFPKAVEAGKAIPYWDVFGLHINQVGYQGQVLPML
NCTC8325 RFGGNPFLGAALGMILVHPSLMSAYDFPKAVEAGKAIPYWDVFGLHINQVGYQGQVLPML
Newman RFGGNPFLGAALGMILVHPSLMSAYDFPKAVEAGKAIPYWDVFGLHINQVGYQGQVLPML
USA300_FPR3757 RFGGNPFLGAALGMILVHPSLMSAYDFPKAVEAGKAIPYWDVFGLHINQVGYQGQVLPML
**********.*************************************************
COL VAAYILASIEKGLRKVIPTVLDNLLTPLLSIFITAFLTFSFVGPITRQLGYWLSDGLTWL
N315 VAAYILASIEKGLRKVIPTVLDNLLTPLLSIFITAFLTFSFVGPITRQLGYWLSDGLTWL
NCTC8325 VAAYILASIEKGLRKVIPTVLDNLLTPLLSIFITAFLTFSFVGPITRQLGYWLSDGLTWL
Newman VAAYILASIEKGLRKVIPTVLDNLLTPLLSIFITAFLTFSFVGPITRQLGYWLSDGLTWL
USA300_FPR3757 VAAYILASIEKGLRKVIPTVLDNLLTPLLSIFITAFLTFSFVGPITRQLGYWLSDGLTWL
************************************************************
COL YEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNVAQGG
N315 YEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNVAQGG
NCTC8325 YEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNVAQGG
Newman YEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNVAQGG
USA300_FPR3757 YEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNVAQGG
************************************************************
COL AAIAAFFIIKQNKKLKGVASAAGISALLGITEPAMFGVNLKLRYPFIGAIVGSGIGSAYI
N315 AAIAAFFIIKQNKKLKGVASAAGISALLGITEPAMFGVNLKLRYPFIGAIVGSGIGSAYI
NCTC8325 AAIAAFFIIKQNKKLKGVASAAGISALLGITEPAMFGVNLKLRYPFIGAIVGSGIGSAYI
Newman AAIAAFFIIKQNKKLKGVASAAGISALLGITEPAMFGVNLKLRYPFIGAIVGSGIGSAYI
USA300_FPR3757 AAIAAFFIIKQNKKLKGVASAAGISALLGITEPAMFGVNLKLRYPFIGAIVGSGIGSAYI
************************************************************
COL AFFKVKAIALGTAGLPGFISINPVHAGWLHYFVGMTISFIIAITVTLILSKRKANKEVVE
N315 AFFKVKAIALGTAGLPGFISINPVHAGWLHYFVGMTISFIIAITVTLILSKRKANKEVVE
NCTC8325 AFFKVKAIALGTAGLPGFISINPVHAGWLHYFVGMTISFIIAITVTLILSKRKANKEVVE
Newman AFFKVKAIALGTAGLPGFISINPVHAGWLHYFVGMTISFIIAITVTLILSKRKANKEVVE
USA300_FPR3757 AFFKVKAIALGTAGLPGFISINPVHAGWLHYFVGMTISFIIAITVTLILSKRKANKEVVE
************************************************************