Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005899000
- symbol?: —
- synonym:
- description?: YbgA family protein
- YbgA family protein
- putative type II DNA modification enzyme
- type II DNA modification enzyme
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5968510..5969047
- synteny block?: BlockID0046440
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2317
08BA02176:
C248_2426
11819-97:
MS7_2397
6850:
RSAU_002216
71193:
ST398NM01_2433
ECT-R 2:
ECTR2_2239
ED133:
SAOV_2426
ED98:
SAAV_2444
HO 5096 0412:
SAEMRSA15_22790
JH1:
SaurJH1_2450
JH9:
SaurJH9_2404
JKD6008:
SAA6008_02417
JKD6159:
SAA6159_02282
LGA251:
SARLGA251_21640
M013:
M013TW_2340
MRSA252:
SAR2467
MSHR1132:
SAMSHR1132_22070
MSSA476:
SAS2270
Mu3:
SAHV_2362
Mu50:
SAV2378
MW2:
MW2300
RF122:
SAB2258
ST398:
SAPIG2433
T0131:
SAT0131_02569 (ccrC)
TCH60:
HMPREF0772_10810
TW20:
SATW20_25100
USA300_TCH1516:
USA300HOU_2363
VC40:
SAVC_10760
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKERGYIEQLWREEKYHVLLHSQQSYQMIRNALKTDLSLHQVQQMIDVALLIEPSIGSVC
N315 MKERGHIEQLWREEKYHVLLHSQQSYQMIRNALKTDLSLHQVQQMIDDALLIEPSIGSVC
NCTC8325 MKERGYIEQLWREEKYHVLLHSQQSYQMIRNALKTDLSLHQVQQMIDVALLIEPSIGSVC
Newman MKERGYIEQLWREEKYHVLLHSQQSYQMIRNALKTDLSLHQVQQMIDVALLIEPSIGSVC
USA300_FPR3757 MKERGYIEQLWREEKYHVLLHSQQSYQMIRNALKTDLSLHQVQQMIDVALLIEPSIGSVC
*****:***************************************** ************
COL NAFDHMWGYLKKCANEEERQQSKLLKADFINGKIDTQTLLDFLAELANKYDVQYLLQSRV
N315 NAFDHMWGYFKKCANEEERKQSKLLKADFINGKIDTQTLLDFLAELANKYDVQYLLQSRV
NCTC8325 NAFDHMWGYLKKCANEEERQQSKLLKADFINGKIDTQTLLDFLAELANKYDVQYLLQSRV
Newman NAFDHMWGYLKKCANEEERQQSKLLKADFINGKIDTQTLLDFLAELANKYDVQYLLQSRV
USA300_FPR3757 NAFDHMWGYLKKCANEEERQQSKLLKADFINGKIDTQTLLDFLAELANKYDVQYLLQSRV
*********:*********:****************************************
COL LNTKRKR
N315 LNTKRKR
NCTC8325 LNTKRKR
Newman LNTKRKR
USA300_FPR3757 LNTKRKR
*******