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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005963000
- symbol?: bioW
- synonym:
- description?: 6-carboxyhexanoate--CoA ligase
- 6-carboxyhexanoate--CoA ligase
- 6-carboxyhexanoate--CoA ligase family protein
- Pimeloyl-CoA synthase
- pseudogene
- putative 6-carboxyhexanoate--CoA ligase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6024624..6025301
- synteny block?: BlockID0047070
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2360
08BA02176:
C248_2471
11819-97:
MS7_2438
6850:
RSAU_002262 (bioW)
71193:
ST398NM01_2476
ECT-R 2:
ECTR2_2282
ED133:
SAOV_2472c
ED98:
SAAV_2489 (bioW)
HO 5096 0412:
SAEMRSA15_23220
JH1:
SaurJH1_2497
JH9:
SaurJH9_2449
JKD6008:
SAA6008_02465 (bioW)
JKD6159:
SAA6159_02324 (bioW)
LGA251:
SARLGA251_22050
M013:
M013TW_2385
MRSA252:
SAR2513
MSHR1132:
SAMSHR1132_22520
MSSA476:
SAS2314
Mu3:
SAHV_2407
Mu50:
SAV2423
MW2:
MW2346
RF122:
SAB2304c
ST398:
SAPIG2476
T0131:
SAT0131_02618
TCH60:
HMPREF0772_10764 (bioW)
TW20:
SATW20_25530
USA300_TCH1516:
USA300HOU_2407 (bioW)
VC40:
SAVC_10990
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENGQPDFLNIKIQKIMEPI
N315 MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENGQPDFLNIKIQKIMEPI
NCTC8325 MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENGQPDFLNIKIQKIMEPI
Newman MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENGQPDFLNIKIQKIMEPI
USA300_FPR3757 MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENGQPDFLNIKIQKIMEPI
************************************************************
COL QQIKALQIIEDDKANLQHLTQECGVTEQALNQGMTYIKNETVYTGAIILSAISGKRLDSF
N315 QQIKALQIIEDDKANLQHLTQECGVTEQALNQGMTYIKNETVYTGAIILSAISGKRLDSF
NCTC8325 QQIKALQIIEDDKANLQHLTQECGVTEQALNQGMTYIKNETVYTGAIILSAISGKRLDSF
Newman QQIKALQIIEDDKANLQHLTQECGVTEQALNQGMTYIKNETVYTGAIILSAISGKRLDSF
USA300_FPR3757 QQIKALQIIEDDKANLQHLTQECGVTEQALNQGMTYIKNETVYTGAIILSAISGKRLDSF
************************************************************
COL GQRGIRATHFSFEDINNKGDLNERVTDALAIASCINAHPYVKGELCVSDDLTYTTGYFAA
N315 GQRGIRATHFSFEDINNKGDLNERVTDALAIASCINAHPYVKGELCVSDDLTYTTGYFAA
NCTC8325 GQRGIRATHFSFEDINNKGDLNERVTDALAIASCINAHPYVKGELCVSDDLTYTTGYFAA
Newman GQRGIRATHFSFEDINNKGDLNERVTDALAIASCINAHPYVKGELCVSDDLTYTTGYFAA
USA300_FPR3757 GQRGIRATHFSFEDINNKGDLNERVTDALAIASCINAHPYVKGELCVSDDLTYTTGYFAA
************************************************************
COL AKIGYHRLFDIKPVNTRYGGRIIFVDDCIDLNHYISFLESTPKQVVYETV
N315 AKIGYHRLFDIKPVNTRYGGRIIFVDDCIDLNHYISFLESTPKQVVYETV
NCTC8325 AKIGYHRLFDIKPVNTRYGGRIIFVDDCIDLNHYISFLESTPKQVVYETV
Newman AKIGYHRLFDIKPVNTRYGGRIIFVDDCIDLNHYISFLESTPKQVVYETV
USA300_FPR3757 AKIGYHRLFDIKPVNTRYGGRIIFVDDCIDLNHYISFLESTPKQVVYETV
**************************************************