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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005983000
- symbol?: —
- synonym:
- description?: AraC family transcriptional regulator
- AraC family transcriptional regulator
- Putative transcriptional activator
- AarP
- endopeptidase, putative
- Positive transcriptional activator, putative
- transcription activator, effector binding domain-containing protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6044305..6044792
- synteny block?: BlockID0047270
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2372
08BA02176:
C248_2484
11819-97:
MS7_2449
6850:
RSAU_002275
71193:
ST398NM01_2487
ECT-R 2:
ECTR2_2293
ED133:
SAOV_2485c
ED98:
SAAV_2501
HO 5096 0412:
SAEMRSA15_23350
JH1:
SaurJH1_2510
JH9:
SaurJH9_2461
JKD6008:
SAA6008_02476
JKD6159:
SAA6159_02333
LGA251:
SARLGA251_22160
M013:
M013TW_2398
MRSA252:
SAR2525
MSHR1132:
SAMSHR1132_22630
MSSA476:
SAS2327
Mu3:
SAHV_2419
Mu50:
SAV2435
MW2:
MW2359
RF122:
SAB2317c
ST398:
SAPIG2487
T0131:
SAT0131_02632
TCH60:
HMPREF0772_10753
TW20:
SATW20_25640
USA300_TCH1516:
USA300HOU_2421
VC40:
SAVC_11050
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIADLQLKNNGDLAGILGL
N315 MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIADLQLKNNGDLAGILGL
NCTC8325 MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIADLQLKNNGDLAGILGL
Newman MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIADLQLKNNGDLAGILGL
USA300_FPR3757 MEYQLQQLASLTLVGIKETYENGRQAQQHIAGFWQRCYQEGVIADLQLKNNGDLAGILGL
************************************************************
COL CIPELDGKMSYMIAVTGDNSADIEKYDVITLASSKYMVFEAQGAVPKAVQQKMEEVHHYI
N315 CIPELDGKMSYMIAVTGDNSADIAKYDVITLASSKYMVFEAQGAVPKAVQQKMEEVHHYI
NCTC8325 CIPELDGKMSYMIAVTGDNSADIEKYDVITLASSKYMVFEAQGAVPKAVQQKMEEVHHYI
Newman CIPELDGKMSYMIAVTGDNSADIEKYDVITLASSKYMVFEAQGAVPKAVQQKMEEVHHYI
USA300_FPR3757 CIPELDGKMSYMIAVTGDNSADIEKYDVITLASSKYMVFEAQGAVPKAVQQKMEEVHHYI
*********************** ************************************
COL HQYQADTVKSAPFFELYQDGDTTSEKYITEIWMPVKG
N315 HQYQANTVKSAPFFELYQDGDTTSEKYITEIWMPVKG
NCTC8325 HQYQADTVKSAPFFELYQDGDTTSEKYITEIWMPVKG
Newman HQYQADTVKSAPFFELYQDGDTTSEKYITEIWMPVKG
USA300_FPR3757 HQYQADTVKSAPFFELYQDGDTTSEKYITEIWMPVKG
*****:*******************************