Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005993000
- symbol?: —
- synonym:
- description?: NAD(P)-dependent oxidoreductase
- NAD(P)-dependent oxidoreductase
- epimerase/dehydratase
- NAD dependent epimerase/dehydratase family protein
- NAD dependent nucleoside-diphosphate-sugar epimerase, putative
- dTDP-glucose 4,6-dehydratase
- epimerase/dehydratase, putative
- NAD-dependent epimerase/dehydratase
- polysaccharide biosynthesis family protein
- putative NAD-dependent epimerase/dehydratase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6054747..6055598
- synteny block?: BlockID0047370
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2379
08BA02176:
C248_2491
11819-97:
MS7_2456
6850:
RSAU_002282
71193:
ST398NM01_2494
ECT-R 2:
ECTR2_2300
ED133:
SAOV_2492c
ED98:
SAAV_2508
HO 5096 0412:
SAEMRSA15_23420
JH1:
SaurJH1_2517
JH9:
SaurJH9_2469
JKD6008:
SAA6008_02483
JKD6159:
SAA6159_02340
LGA251:
SARLGA251_22230
M013:
M013TW_2405
MRSA252:
SAR2532
MSHR1132:
SAMSHR1132_22700
MSSA476:
SAS2334
Mu3:
SAHV_2426
Mu50:
SAV2442
MW2:
MW2366
RF122:
SAB2324c
ST398:
SAPIG2494
T0131:
SAT0131_02640 (fabG)
TCH60:
HMPREF0772_10746
TW20:
SATW20_25710
USA300_TCH1516:
USA300HOU_2430
VC40:
SAVC_11085
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKIFVTGATGLIGIKLVQRLKEEGHEVAGFTTSENGQQKLAAVNVKAYIGDILKADTID
N315 MSKIFVTGATGLIGIKLVQRLKEEGHEVAGFTTSENGQQKLAAINVKAYIGDILKADTID
NCTC8325 MSKIFVTGATGLIGIKLVQRLKEEGHEVAGFTTSENGQQKLAAVNVKAYIGDILKADTID
Newman MSKIFVTGATGLIGIKLVQRLKEEGHEVAGFTTSENGQQKLAAVNVKAYIGDILKADTID
USA300_FPR3757 MSKIFVTGATGLIGIKLVQRLKEEGHEVAGFTTSENGQQKLAAVNVKAYIGDILKADTID
*******************************************:****************
COL QALADFKPEIIINQITDLKNVDMAANTKVRIEGSKNLIDAAKKHDVKKVIAQSIAFMYEP
N315 QALADFKPEIIINQITDLKNVDMAANTKVRIEGSKNLIDAAKKHDVKKVIAQSIAFMYEP
NCTC8325 QALADFKPEIIINQITDLKNVDMAANTKVRIEGSKNLIDAAKKHDVKKVIAQSIAFMYEP
Newman QALADFKPEIIINQITDLKNVDMAANTKVRIEGSKNLIDAAKKHDVKKVIAQSIAFMYEP
USA300_FPR3757 QALADFKPEIIINQITDLKNVDMAANTKVRIEGSKNLIDAAKKHDVKKVIAQSIAFMYEP
************************************************************
COL GEGLANEETSLDFNSTGDRKVTVDGVVGLEEETARMDEYVVLRFGWLYGPGTWYGKDGMI
N315 GEGLANEETSLDFNSTGDRKVTVDGVVGLEEETARMDEYVVLRFGWLYGPGTWYGKDGMI
NCTC8325 GEGLANEETSLDFNSTGDRKVTVDGVVGLEEETARMDEYVVLRFGWLYGPGTWYGKDGMI
Newman GEGLANEETSLDFNSTGDRKVTVDGVVGLEEETARMDEYVVLRFGWLYGPGTWYGKDGMI
USA300_FPR3757 GEGLANEETSLDFNSTGDRKVTVDGVVGLEEETARMDEYVVLRFGWLYGPGTWYGKDGMI
************************************************************
COL YNQFMDGQVTLSDGVTSFVHLDDAVETSIQAIHFENGIYNVADDAPVKGSEFAEWYKEQL
N315 YNQFMDGQVTLSDGVTSFVHLDDAVETSIQAIHFENGIYNVADDAPVKGSEFAEWYKEQL
NCTC8325 YNQFMDGQVTLSDGVTSFVHLDDAVETSIQAIHFENGIYNVADDAPVKGSEFAEWYKEQL
Newman YNQFMDGQVTLSDGVTSFVHLDDAVETSIQAIHFENGIYNVADDAPVKGSEFAEWYKEQL
USA300_FPR3757 YNQFMDGQVTLSDGVTSFVHLDDAVETSIQAIHFENGIYNVADDAPVKGSEFAEWYKEQL
************************************************************
COL GVEPNIDIQPAQPFERGVSNEKFKAQGGTLIYQTWKDGMNPIK
N315 GVEPNIDIQPAQPFERGVSNEKFKAQGGTLIYKTWKDGMNPIK
NCTC8325 GVEPNIDIQPAQPFERGVSNEKFKAQGGTLIYQTWKDGMNPIK
Newman GVEPNIDIQPAQPFERGVSNEKFKAQGGTLIYQTWKDGMNPIK
USA300_FPR3757 GVEPNIDIQPAQPFERGVSNEKFKAQGGTLIYQTWKDGMNPIK
********************************:**********